Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0203 |
Symbol | rplS |
ID | 5205525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | + |
Start bp | 239796 |
End bp | 240212 |
Gene Length | 417 bp |
Protein Length | 138 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640598415 |
Product | 50S ribosomal protein L19 |
Protein accession | YP_001279112 |
Protein GI | 148652019 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0335] Ribosomal protein L19 |
TIGRFAM ID | [TIGR01024] ribosomal protein L19, bacterial type |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000333718 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.100248 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAATG TACATCCATT AGTACAAGCA GTTGAAAATT CACAACTACT TGAGCGTCCT AACTTCTCTG CTGGTGATAC AGTTGTTGTT CAAGTAAAAG TTCGTGAAGG TGACCGTGAG CGTCTTCAGG CTTTTGAAGG TGTGGTAATC GCTAAGCGTA ACCGTGGTCT TAACTCTGCA TTTACCGTTC GTAAAATCTC AAGCGGTATC GGTGTTGAGC GTGCTTTCCA ATTACATTCA CCAATCATTC ACAGCATTGA AGTGAAGCGT CGTGGTGCTG TACGTCGTGC GAAACTTTAC TACTTACGTG AGCGTTCTGG TAAATCTGCA CGTATCCGTG AGAAATTATC TGCACGCGTT CAGACTAAAA CTAGCGCGAA CGTTCCAGAA GCAGTAGAAA CTGCACCAGG CATCTAA
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Protein sequence | MSNVHPLVQA VENSQLLERP NFSAGDTVVV QVKVREGDRE RLQAFEGVVI AKRNRGLNSA FTVRKISSGI GVERAFQLHS PIIHSIEVKR RGAVRRAKLY YLRERSGKSA RIREKLSARV QTKTSANVPE AVETAPGI
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