Gene PsycPRwf_0189 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0189 
Symbol 
ID5204540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp224572 
End bp225042 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content44% 
IMG OID640598401 
ProductF0F1 ATP synthase subunit B 
Protein accessionYP_001279098 
Protein GI148652005 
COG category[C] Energy production and conversion 
COG ID[COG0711] F0F1-type ATP synthase, subunit b 
TIGRFAM ID[TIGR01144] ATP synthase, F0 subunit b 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0046503 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAATATTA ATCTTACCCT AATCGGTCAG TCCATAGCGT TTGCAATTTT TGTTCTGTTT 
TGCATGAAGT TCATTTGGCC CGCTCTTATG GGTGCTATTA GTGAGCGTCA GCAAAAGATA
GCTGATGGTC TTAATGCAGC CGAGAAGGCA AAAGCAGACT TAGCAAGTGC TGAACAATCA
GTTGAGCAAG AACTTGCGAC AGCGAAAGCG AAAGCTGCTG CACTGATTGA GCAAGCGAAC
AAAAGCGCTA ACCAGCTTAT CGAAGAAGCA AAAGCGCAAG CCCAAGTGGA AGGCGAACGT
ATTCGTCAAC AAGCCCGTGA ATCAATCGAT CTTGAGATCA ATCAAGCACG TGAAAGTTTA
CGTACTCAGG TTTCTGAGCT TGCCGTACTT GGTGCTGAGC AAATTCTAAA AGAAAAAGTT
GATCAGCAAA CGCACGCCAA TATGCTTAAT GAATTGGCTG CTAAGCTATA A
 
Protein sequence
MNINLTLIGQ SIAFAIFVLF CMKFIWPALM GAISERQQKI ADGLNAAEKA KADLASAEQS 
VEQELATAKA KAAALIEQAN KSANQLIEEA KAQAQVEGER IRQQARESID LEINQARESL
RTQVSELAVL GAEQILKEKV DQQTHANMLN ELAAKL