Gene PsycPRwf_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsycPRwf_0171 
Symbol 
ID5205780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter sp. PRwf-1 
KingdomBacteria 
Replicon accessionNC_009524 
Strand
Start bp205637 
End bp206113 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content51% 
IMG OID640598383 
Producthypothetical protein 
Protein accessionYP_001279080 
Protein GI148651987 
COG category[S] Function unknown 
COG ID[COG2983] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000313306 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.665672 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTGAAG CGCAGTTAAG AGCTAATTTT TGGCAACATT ATCCGCTACA TGAGCTGAGC 
ACAGCTGAAT GGGAGGCTTT ATGTGATGGC TGTGGGGGCT GCTGTTTGGA GAAGTTTTTG
GACGATCCAG ATGAGCCATA CGAAGTAGAG TACACGGATG TGGCGTGTAA GCTACTTGAT
TGTAGTACCG GCTATTGCTC CAACTATGAG CACCGTCAGC AGTTCGTGCC TGAGTGTGTG
TCTTTGACCG CAGATAAGCT GCCAGACATG ATGTGGCTGC CCAGCAATTG TGCTTATAAA
CGTATTTACT TGGGAGAGGG GCTGCCCAGC TGGCACTTAC TGCTTACCCA AGATATTGAA
TTGACCCGAC AGGGTATGCG TCGGGCAGGC GTGGGGGTGG CAGGCCGCTG TGTCAGTGAA
GATTTTGTGA ATGAGGATGA GTTGGAGGAG CGCATTGTGC GCTGGATACA GGCTTAG
 
Protein sequence
MSEAQLRANF WQHYPLHELS TAEWEALCDG CGGCCLEKFL DDPDEPYEVE YTDVACKLLD 
CSTGYCSNYE HRQQFVPECV SLTADKLPDM MWLPSNCAYK RIYLGEGLPS WHLLLTQDIE
LTRQGMRRAG VGVAGRCVSE DFVNEDELEE RIVRWIQA