| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0128 |
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| Symbol | |
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| ID | 5204555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 152506 |
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| End bp | 153930 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640598337 |
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| Product | protease Do |
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| Protein accession | YP_001279038 |
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| Protein GI | 148651945 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.445461 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGGCAC TGAGTGGCTT TGGCATAGGT AGCTTGGGGC TAACCGCAGG CACAGCTTTA
TTGGCTACCT CTGCGACTAT ACCTACGGCA GCACAGGCCG CGGTTGTGGC TTCAGATTTC
TCAGATTTGG TGGAGCAGGT GAGCCCGGGC GTTGCTAGAG TCAACGTAGT GACTAAGGTG
AGTGAAGAGG AGCTTGCCAA GGCTCAAACG GTTGAGCTGC TGCGACAGTT CTTCGGCGAC
CGCATTCGCA TTCCAGGTGC CCAAACAGCC CCGGCCATTG AATACAACTA TGGTACGGGC
TTTTTTGTGA CCTCAGATGG TTATCTGTTG ACCAATCACC ATGTGATTGC GGGGGCAGAT
AAGATTACGG TCACCTTAAA TGACCGCACC GAGCTTGATG CTACCTTGGT CGGCAGCGAT
GAGCGCTCTG ATGTGGCGGT ATTAAAGGTA AAAGCCCAGC CAGGTAAGTC TTATCCTGCG
CTGCCTACCG GTGACTCCAA TGCGGTAAAA GTGGGTGAGC CAGTATTGGC TATTGGCTCG
CCTTTTGGTT TTGATTATTC AGCGTCGGCC GGTATCGTCA GTGCCAAGTC GCGTAACTTC
TCACGGGATA TTAGCGTGCC CTTTATCCAG TCGGATGTGG CGCTAAACCC AGGCAACTCA
GGCGGTCCAC TATTTAATCG TAACGGCCAA GTTATTGGCA TTAACTCACG AATATTCAGT
GGTACTGGCG GCTATATGGG ACTGTCTTTT TCTATCCCCA TTAATGAGGC GATGGATATT
TATCAGCAGC TAAAACAAAC CGGTACAGTG TCACGCGCTT ATCTGGGTAT ATTTCCTCAA
GACATCGACC GCAACTTGGC CGAAGCTTAT GGCCTAAGTA AGCCGCAAGG GGCGCTACTG
ATTAAGGTTA CCCCTAAATC GCCAGCAGAA GCAGCTGGCC TAAAGGCGGG CGATATCATC
ACCCATTACA ACGGCAAAAT GATTTTAGAA TCCTCTGACC TTTTAAACAT CATTAACCGC
AGTAAGCCAG GTGAGAGCTT TAAGGCCGAT GTATTGCGTC AAGGCAAAAA GATTGCAGTC
ATTGGTAAGT TATCAGCAGC GCCCGATGAT GTGGCACCAG ATGCGGTGGT CACTAAGTCT
AATAACAGCC AAATTCGTCT AGGCTTGCGC ATTCAGGCGC TGCCTCGTGA AAGCTTGGCA
CAGCTGGACG GAGAAGGGGT ATTGGTAACC GAGGTAGATC CTACAGGGAT AGCAGCCAGA
GCTGGTATAA GAGCCGGTGA CGTTATCACT AACCTGCATC AGAAGTCGAT TAAGAGTATC
GATGACTTCC AGCGGGCGCT ACGTCAATTA CCTGAAGCGG GCGTGGTGAC CATTGAGGTG
GTGCGTCAAG GTATCCCAGC CATTATCGGT CTGCGTTTGG ATTAG
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| Protein sequence | MLALSGFGIG SLGLTAGTAL LATSATIPTA AQAAVVASDF SDLVEQVSPG VARVNVVTKV
SEEELAKAQT VELLRQFFGD RIRIPGAQTA PAIEYNYGTG FFVTSDGYLL TNHHVIAGAD
KITVTLNDRT ELDATLVGSD ERSDVAVLKV KAQPGKSYPA LPTGDSNAVK VGEPVLAIGS
PFGFDYSASA GIVSAKSRNF SRDISVPFIQ SDVALNPGNS GGPLFNRNGQ VIGINSRIFS
GTGGYMGLSF SIPINEAMDI YQQLKQTGTV SRAYLGIFPQ DIDRNLAEAY GLSKPQGALL
IKVTPKSPAE AAGLKAGDII THYNGKMILE SSDLLNIINR SKPGESFKAD VLRQGKKIAV
IGKLSAAPDD VAPDAVVTKS NNSQIRLGLR IQALPRESLA QLDGEGVLVT EVDPTGIAAR
AGIRAGDVIT NLHQKSIKSI DDFQRALRQL PEAGVVTIEV VRQGIPAIIG LRLD
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