6 homologs were found in PanDaTox collection
for query gene PsycPRwf_0124 on replicon NC_009524
Organism: Psychrobacter sp. PRwf-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009524  PsycPRwf_0124  Type II site-specific deoxyribonuclease  100 
 
 
254 aa  528  1e-149  Psychrobacter sp. PRwf-1  Bacteria  hitchhiker  0.0000000914732  normal 
 
 
-
 
NC_007204  Psyc_0143  putative type II restriction endonuclease DpnI  67.59 
 
 
254 aa  363  1e-99  Psychrobacter arcticus 273-4  Bacteria  normal  hitchhiker  0.00925185 
 
 
-
 
NC_007969  Pcryo_0153  putative type II restriction endonuclease DpnI  70.59 
 
 
219 aa  303  2.0000000000000002e-81  Psychrobacter cryohalolentis K5  Bacteria  normal  normal 
 
 
-
 
NC_013512  Sdel_1531  Type II site-specific deoxyribonuclease  51.95 
 
 
255 aa  271  1e-71  Sulfurospirillum deleyianum DSM 6946  Bacteria  unclonable  0.0000000196372  n/a   
 
 
-
 
NC_002967  TDE1268  type II restriction endonuclease TdeI  49.81 
 
 
256 aa  269  2.9999999999999997e-71  Treponema denticola ATCC 35405  Bacteria  normal  0.122022  n/a   
 
 
-
 
NC_010655  Amuc_1564  Type II site-specific deoxyribonuclease  49.42 
 
 
256 aa  263  2e-69  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>