Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PsycPRwf_0124 |
Symbol | |
ID | 5205293 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter sp. PRwf-1 |
Kingdom | Bacteria |
Replicon accession | NC_009524 |
Strand | - |
Start bp | 146473 |
End bp | 147237 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640598333 |
Product | Type II site-specific deoxyribonuclease |
Protein accession | YP_001279034 |
Protein GI | 148651941 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000914732 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTAC AGTTTAATCA ACAGTTGGCA AAAGGCTATA AGTCAAAAAG CCAAATTATT CGAGTGCTAA GTGAAGGCTG GGTTGCTCAT CAAGGCTACT GTCCTAATTG TGGTAATAAC CGGTTATCGG GCTTTGCTAA CAACCAACCT GTCGCCGACT TTTACTGTCC ACAGTGCCAC GAACAGTACG AGCTAAAGAG TAAAAAAGCA AAGCTGAGTC ATGTCATTAA TGATGGTGCT TATGCCACTA TGATTGAGCG TATTAAAAGT GACGACAATC CCAATTTCTT TTTCTTAACC TATTCTGATG AACTAGTCGT TAACAACTTT TTAATTATCC CAAAGCACTT TTTTACCACC GACATGATTA TTAAGCGCCC ACCTCTGCCG CCTACAGCAA GACGTGCAGG GTGGATTGGC TGTAATATTA ATCTAAAAAA AGTGCCTGAA ATCGGCAAAG TGTTTTTGGT GAAAAACCAG CAGCCTGTCG CAACTGAGCA GGTCACCGAG CAATTCCAAA AGTCTTTATT TTTACGTCAA CAAAAGCAGC AAAGCCGTGG CTGGACATTA GAGATTATGA GCTGCGTCGA TAAGCTACCG CCCCAATTTA GCCTGAATGA TATTTACCAG TTTAGCAACT ATTTAAGGAC TCGCTACCCC AATAACAATA ATATTGAGGC AAAAATACGT CAGCAATTAC AGATACTGCG CGATAAAGGG CTGCTGCAAT TTTTAGGAAA TGGGCGGTAT CGCAAAATAG GCTGA
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Protein sequence | MDLQFNQQLA KGYKSKSQII RVLSEGWVAH QGYCPNCGNN RLSGFANNQP VADFYCPQCH EQYELKSKKA KLSHVINDGA YATMIERIKS DDNPNFFFLT YSDELVVNNF LIIPKHFFTT DMIIKRPPLP PTARRAGWIG CNINLKKVPE IGKVFLVKNQ QPVATEQVTE QFQKSLFLRQ QKQQSRGWTL EIMSCVDKLP PQFSLNDIYQ FSNYLRTRYP NNNNIEAKIR QQLQILRDKG LLQFLGNGRY RKIG
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