| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0102 |
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| Symbol | |
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| ID | 5206174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 121869 |
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| End bp | 123482 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640598311 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001279012 |
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| Protein GI | 148651919 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.102568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCTTG TTAGTGCGTG GCTATGGTGC TTGCCGGCGC AAGCGCTAAC TGAAGCAGAG
CAGCAAGGTA CTAACAGTGA GGCCGCAAGC GTCAGTGCCG AGCCGGTGGC GAGTAATCAA
GAGATTGAGC AGCAACCGGT GGACTCAGAT AAGCCAGACA TAGCTGAGAC ACCGGGCGCG
GTCAATGTGC CTACCGCAGG CAATATAACC GACAAAGATA CCGTGATTGC CACCAAGCCT
GATCAGGTCA ATGATCAAGA TATCAAGCAG CGCATTAGCG GTATCTACTC TGAGATTGAA
GGATTAAAAG CGCTTAGCGT TACGGTTAGC CAAGGTGTGG TCAGTATATC GGGTGAAGTG
CCCAATGAAA AAAAGGCGCA GCAAGCCATT AGCTTAGCCA ATAGGGTCAG CGATGTGGTG
GCCGTCGAGG ACCGCATTAG TCGTACGCTG GATGTGCAAG ACAATGTCAC GCCGGTAATT
AGTTCGCTAA ACCAGCAAAT CCGTGCTTTT ATCCAGGCGT TACCGCTGCT GGTAGTGGCC
ATTTTAGTGT TTGCTGCGGT GGTTTGGTTT GGGTCTTGGC TGGCACGGCG TGAGTCGTTA
TGGCAGCGCA TCACTCCCAA TCCCTTTATT GCCGAACTGC TGGCACAAAC GGTTAAGGTG
CTGTTCTTTA TTATTGCGCT GTTGCTCGGC TTAAGCCTGA TGGGGGCTGA GGCCATCATT
GGTACCTTGC TCGGAGGTGC CGGTGTCATC GGTATTGCAG TGGGCTTTGC AGTAAAAGAC
ACCATTGAAA ACTATATTGC CTCTTTGATG CTCAGTATCC GTCAGCCCTT TCAGGCGCGA
GATTTGGTCA GTATTAATGG TCAGCAAGGC ATTGTGGTAC GTCTGACCAG TCGGGCCACC
ATTTTGATGA CCTCAGATGG CAATCAATTG CGGTTGCCAA ATTCAGAGGT GTTTAAAGGT
ACTATCTTAA ACTACACCAA AAACCCCGAG CGCCGTTTTA CCTTTCAGTT GGGCGTCGAT
GCTAATGATG ACCCCTTAGC AGCAATCAAG GTAGGCTTAG AGGCAGTTAA CAGTCTGGAT
TTCGTCCTTG ATAACCCAAA AGCTGTGTGC ATTATTACTG AAGTCGGTGA CTCCAATATC
ATGCTCGAAT TTCAAGTATG GGTCGATCAA ACCGATACCG ATATCATGAA AGCTCGTAGT
ATCGCTATTC GTGAAGCCAA GCATGCTCTT GAGGACCATG GCTTTAGCTT ACCTGAACCG
ATTTATCGGT TGCGCTTTAA CCAAGATGTA GAGCATGCCA TCATGCAATT GCATAGCGCC
TTATCCGGTG AATCAGCAGA GTCTACTGAA TATGACAACA GCTTTGTGGC AAATAACCCT
AAGCTGATTG AAGCGCTGAG CAAACAAATA GCGGCACTCA ATAATCAAGC CAAACCAGAT
ACCGCACAAA AAGAGCAAGC CAAGCAGCGC GCCAAGCAGA TACTGGGTGA TAAGGCGGTC
AAAGAGATCT TTGATGCCAA GCCTGATCCA AAATTGATGC AAAAAGTAGA AGAGGAAATC
CAAGACCACA GCGGTGATAA AGACTTATTA GATGGCAATA GTCCGCAAGA GTAA
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| Protein sequence | MLLVSAWLWC LPAQALTEAE QQGTNSEAAS VSAEPVASNQ EIEQQPVDSD KPDIAETPGA
VNVPTAGNIT DKDTVIATKP DQVNDQDIKQ RISGIYSEIE GLKALSVTVS QGVVSISGEV
PNEKKAQQAI SLANRVSDVV AVEDRISRTL DVQDNVTPVI SSLNQQIRAF IQALPLLVVA
ILVFAAVVWF GSWLARRESL WQRITPNPFI AELLAQTVKV LFFIIALLLG LSLMGAEAII
GTLLGGAGVI GIAVGFAVKD TIENYIASLM LSIRQPFQAR DLVSINGQQG IVVRLTSRAT
ILMTSDGNQL RLPNSEVFKG TILNYTKNPE RRFTFQLGVD ANDDPLAAIK VGLEAVNSLD
FVLDNPKAVC IITEVGDSNI MLEFQVWVDQ TDTDIMKARS IAIREAKHAL EDHGFSLPEP
IYRLRFNQDV EHAIMQLHSA LSGESAESTE YDNSFVANNP KLIEALSKQI AALNNQAKPD
TAQKEQAKQR AKQILGDKAV KEIFDAKPDP KLMQKVEEEI QDHSGDKDLL DGNSPQE
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