| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PsycPRwf_0101 |
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| Symbol | |
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| ID | 5206173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter sp. PRwf-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009524 |
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| Strand | + |
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| Start bp | 120917 |
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| End bp | 121696 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640598310 |
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| Product | 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase |
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| Protein accession | YP_001279011 |
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| Protein GI | 148651918 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0106] Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase |
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| TIGRFAM ID | [TIGR00007] phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0068649 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTACTC AATCTCCTTT TACCCAAAAT ACCGATGTAA CGACCGCTGT GGCACCACTT
CTTATTCCTG CCATTGATCT AAAAGATGGC AAGTGCGTGC GTCTTAAGCA AGGCCGTATG
GAAGATGACA CCGTATTTTC TGACGACCCT GTGGCGATGG CCACTCGCTG GGTGAATGAG
GGTGCCCGCC GTTTGCATTT GGTGGACCTA AATGGTGCCT TTGATGGTGT GCCGGTGCAC
AAAGATGTGG TGATGCAAAT CGCTAAGGCG CATCCGAACC TACCTGTACA GCTTGGCGGC
GGTGTACGCA GCCTACAGAC CATTGAGCAT TATCTGGCTG CGGGACTGAC CTATATTATT
ATCGGTACCA AAGCGGTTGA AAACCCCGAG TTTGTGGAAG AGGCTTGCCG AGAGTTTGCC
GGTCATATCA TCGTCGGTAT TGATGCCAAA GACGGCATGG TTGCTACCCA TGGCTGGGCC
AATGTCACCG ATACTAAGGC CACTGAGCTT GCTAAGCGCT TTGCTGATGC TGGCGTATCT
TCTATCGTGT ATACCGATAT TGCGCGTGAT GGCATGATGC AAGGCGTGAA CGTCGAGCAA
ACCGTGAATT TGGCCCGTGT TGGTGGTCTG CCGGTTATCG CATCAGGCGG CGTGACTGAT
ATGAAAGACA TTGAGCTGCT AAAACCCTAT GGCGACTGCA TTGAGGGTAT CATTACAGGC
CGGGCTATTT ATGAAGGCAC CCTAGATCTG GGCGAGGCTC AGGCTTATTT GGATAAGTAG
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| Protein sequence | MRTQSPFTQN TDVTTAVAPL LIPAIDLKDG KCVRLKQGRM EDDTVFSDDP VAMATRWVNE
GARRLHLVDL NGAFDGVPVH KDVVMQIAKA HPNLPVQLGG GVRSLQTIEH YLAAGLTYII
IGTKAVENPE FVEEACREFA GHIIVGIDAK DGMVATHGWA NVTDTKATEL AKRFADAGVS
SIVYTDIARD GMMQGVNVEQ TVNLARVGGL PVIASGGVTD MKDIELLKPY GDCIEGIITG
RAIYEGTLDL GEAQAYLDK
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