Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5271 |
Symbol | |
ID | 5195312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5917396 |
End bp | 5917923 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640589754 |
Product | hypothetical protein |
Protein accession | YP_001270573 |
Protein GI | 148550471 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.8199 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGATTC GTCTGCCACT GTTGGCGTTG GCCCTAGGCA TGAGCAGTCC GCTGGTGCAA GCCCAGATGC TGCAACCGGG GTTGTGGGAG CTGACCACCA GCAACATGCA GGTCGATGGC AAGCCGCTAC CCGACATGGA ATTCATGCTT GGCCAGTTGA AGAACCTGCC GCCAGAGCAG CGCGCAATGA TGGAGGGGGT GTTGGCCAAA CAAGGGGTCA GTGTAGGTGG CAAGGGTGTG CGTTCGTGCC TGACACCAGA ACAGGTGGCA ACGAATGATA TTCCGCTGCA GGACCCGAAA TCGGGCTGCA CTCAGAAGAT TACCGACCGT ACCGGTAACG TGTGGAAATT CCAGTTCAGC TGCCCGAAGG CACAGGGTAG TGGCCAGGCT ACATTTCTCA GTGATCGGGA ATTCACCACC CAGGTCAGTG GCACGTTCAA CGCTTCGGGT GTGCAGCAGC AAGGCAGCAT GAACACGCGT GCGGTGTGGC TAGGCAATGA CTGCGGGACG GTCAAACCGC GCAGCTGA
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Protein sequence | MKIRLPLLAL ALGMSSPLVQ AQMLQPGLWE LTTSNMQVDG KPLPDMEFML GQLKNLPPEQ RAMMEGVLAK QGVSVGGKGV RSCLTPEQVA TNDIPLQDPK SGCTQKITDR TGNVWKFQFS CPKAQGSGQA TFLSDREFTT QVSGTFNASG VQQQGSMNTR AVWLGNDCGT VKPRS
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