Gene Pput_5271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5271 
Symbol 
ID5195312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5917396 
End bp5917923 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content58% 
IMG OID640589754 
Producthypothetical protein 
Protein accessionYP_001270573 
Protein GI148550471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.8199 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATTC GTCTGCCACT GTTGGCGTTG GCCCTAGGCA TGAGCAGTCC GCTGGTGCAA 
GCCCAGATGC TGCAACCGGG GTTGTGGGAG CTGACCACCA GCAACATGCA GGTCGATGGC
AAGCCGCTAC CCGACATGGA ATTCATGCTT GGCCAGTTGA AGAACCTGCC GCCAGAGCAG
CGCGCAATGA TGGAGGGGGT GTTGGCCAAA CAAGGGGTCA GTGTAGGTGG CAAGGGTGTG
CGTTCGTGCC TGACACCAGA ACAGGTGGCA ACGAATGATA TTCCGCTGCA GGACCCGAAA
TCGGGCTGCA CTCAGAAGAT TACCGACCGT ACCGGTAACG TGTGGAAATT CCAGTTCAGC
TGCCCGAAGG CACAGGGTAG TGGCCAGGCT ACATTTCTCA GTGATCGGGA ATTCACCACC
CAGGTCAGTG GCACGTTCAA CGCTTCGGGT GTGCAGCAGC AAGGCAGCAT GAACACGCGT
GCGGTGTGGC TAGGCAATGA CTGCGGGACG GTCAAACCGC GCAGCTGA
 
Protein sequence
MKIRLPLLAL ALGMSSPLVQ AQMLQPGLWE LTTSNMQVDG KPLPDMEFML GQLKNLPPEQ 
RAMMEGVLAK QGVSVGGKGV RSCLTPEQVA TNDIPLQDPK SGCTQKITDR TGNVWKFQFS
CPKAQGSGQA TFLSDREFTT QVSGTFNASG VQQQGSMNTR AVWLGNDCGT VKPRS