| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5232 |
|---|
| Symbol | |
|---|
| ID | 5194336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 5874084 |
|---|
| End bp | 5874968 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640589715 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001270534 |
|---|
| Protein GI | 148550432 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.240509 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAAAG TGAATGTGCT GGTCGTGGAT GACGCCCCGT TTATCCGTGA TCTGGTCCGC
AAGTGTCTGC GCAACGCCTT CCCGGGTATG GCCATCGACG ACGCGGTCAA CGGTCGCAAG
GCCATGGCCA TGCTCGGCAA GGAAGCGTTC GATCTGGTCC TCTGCGACTG GGAAATGCCG
GAAATGTCAG GCCTGGAACT GCTGACCTGG TGCCGTCAGC AGCCTGCACT GAAGAACCTG
CAGTTCATCA TGGTGACCAG CCGTGGCGAC AAGGAAAACG TCATTCAGGC GATCCAGGCG
GGCGTTTCCG ATTTTGTAGG CAAGCCGTTC ACCAACGAGC AACTGCTGAC CAAGGTAAAA
AAAGCCCTGA CCAAGATCGG TAAGCTCGAC AGCCTGATGG CCATCGGCCC GGCGCGAGCC
AACCCGGCGT TTGCCAACGA TTCGTTGAAC GCGCTGACGG CGGGCAAGCC CGAAGCGGTC
AAGGTGGCGG CGCCGGTACC GGCCAAGCCT TTGGTCGCCG CACCCGCACC TGCTGCCCCC
GCGCCGAGCG GCCGTGGCCA GGGCCAGCTG CGCCTGGCCA GTGGCATGCA GCCATGCGTG
ATCAAGGCGT TGAGCCTGAA AGAGGCACTG CTGGTGGTAC GCCGCAGCGA AGTGCTGCCA
CAGGTGCTGG AAGGTGCGGT GCTGGACCTG GAGCAGGGCG AAAGTGCCGA AGTTGCTCGC
CTGAACGGCT ACCTGCATGC GGTGGCGGCG CTGGAGCCAA AACCTGACAG CGACTGGTTG
CAGTTGACGT TCAAGTTTGT CGACCAGGAT GCCCAGAAGC TCGACTACCT GTCTCGGTTG
ATTGCCCGCG GCACTGCGCA GAAGCACTTC ACCCCCGGTG CCTGA
|
|---|
| Protein sequence | MSKVNVLVVD DAPFIRDLVR KCLRNAFPGM AIDDAVNGRK AMAMLGKEAF DLVLCDWEMP
EMSGLELLTW CRQQPALKNL QFIMVTSRGD KENVIQAIQA GVSDFVGKPF TNEQLLTKVK
KALTKIGKLD SLMAIGPARA NPAFANDSLN ALTAGKPEAV KVAAPVPAKP LVAAPAPAAP
APSGRGQGQL RLASGMQPCV IKALSLKEAL LVVRRSEVLP QVLEGAVLDL EQGESAEVAR
LNGYLHAVAA LEPKPDSDWL QLTFKFVDQD AQKLDYLSRL IARGTAQKHF TPGA
|
|---|
| |