Gene Pput_5221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5221 
Symbol 
ID5193877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5864681 
End bp5865055 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content58% 
IMG OID640589704 
Producthypothetical protein 
Protein accessionYP_001270523 
Protein GI148550421 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.568933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.611429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTTCC GCTTTCTTCT CTGGGCCATG GGGCTGTTGA TGGCCAGGGC CAGCCGTAAT 
AACCCCGCAT TCCAGCAGCA GCTCAAGGGC AAGGACCTGG TGTTCCAGAT GCAGACCTTG
GACGGCAAGG TCGCCCGACA CTTCATCGTC AGCAACGAGC GCATCAGCAG CAAGGGCGGC
GCGCACCCAC AGCCGGCGTT CGCCATTGCC TTCAGGAACG CCGCTTATGG CTTCGCCACC
ATGCAGGCGG GTAACAAGCA GCTGGCGTTC ATGCAGGGGA TTCAGGAAAA GCACATCCAG
ATCAAGGGCA ATCCGGCGCT GGTGATGTGG TTCCAAGGGT TGATGAAATA CCTGAAACCC
AAGAAGAAAG GCTGA
 
Protein sequence
MKFRFLLWAM GLLMARASRN NPAFQQQLKG KDLVFQMQTL DGKVARHFIV SNERISSKGG 
AHPQPAFAIA FRNAAYGFAT MQAGNKQLAF MQGIQEKHIQ IKGNPALVMW FQGLMKYLKP
KKKG