Gene Pput_5182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5182 
Symbol 
ID5195263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5826243 
End bp5826596 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content66% 
IMG OID640589665 
Producthypothetical protein 
Protein accessionYP_001270484 
Protein GI148550382 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.535352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0921514 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTGTA ACCGCCACAA GATCCACTTC CTGCGCGAAC TCATCCCCTC TTTCGAGTGC 
GAGCCCGGCT GCCACGACTG CTGCGGCCCG GTCACCACCT CGGCGGAAGA AATGGCCCGG
CTGCCGCGCA AGTCCCAGGC CGAGCAGGAC GCTGCTCTGG AGCGTCTGGA CTGCGTGCAC
CTGGGCCCCC ACGGCTGCAC GGTGTATGAA GAGCGGCCGA TGATCTGTCG GCTGTTCGGT
ACCACCCCGC GCATGGCCTG CCCGCGTGGT CGTGGCCCTG AACCGATGAT CGACCCCGCC
GCTGAACAGT TGGTCCACCA GTTCATTGCC ACCACCCGCC AGGTGCTGGT CTAG
 
Protein sequence
MSCNRHKIHF LRELIPSFEC EPGCHDCCGP VTTSAEEMAR LPRKSQAEQD AALERLDCVH 
LGPHGCTVYE ERPMICRLFG TTPRMACPRG RGPEPMIDPA AEQLVHQFIA TTRQVLV