| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_5172 |
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| Symbol | |
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| ID | 5193950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5813477 |
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| End bp | 5814865 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589655 |
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| Product | multidrug efflux protein NorA |
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| Protein accession | YP_001270474 |
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| Protein GI | 148550372 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.204458 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGTCG CGCCCACCAC AGAACTCAAG GCTTTGCTGC GCCTGGCCGG GCCGCTGATT
GCCTCGCAGT TGGCGCACAT GCTGATGGTG CTGACCGACA CCCTGATGAT GGCCCGCATC
AGCCCCCAGG CCTTGGCGGG GGGTGGCCTG GGGGCAGCCA GCTATTCGTT CGTATCGATC
TTCTGCCTGG GCGTGATCGC CGCAGTCGGC ACGCTGGTGG CCATTCGCAA GGGTGCCAAC
GACATCGAGG GCGCCACCCG GCTGGCGCAG AACGGCCTGT GGCTGGCCTG GGCCTTGGCG
CTGTTCGCCG CGCTGGTGCT GTGGAACCTT GAACCTGTGC TGCTGCTGTT CGGGCAGAAG
CCCGAGAACG TGGCCTCGGC CGCCGAATTT CTCACCCTGC TGCCACTGGC CCTGCCCGGC
TATCTGACCT TCATGGCCTT GCGTGGCTTC ACCAGCGCGC TGGGCCGCTC GACCCCGGTG
ATGGTCATCA GTTTGTTCGG CACAGTGCTC AACTACCTGT TCAATGTGGC ACTGATCGAA
GGCATGTTCG GCCTGCCCAA GCTGGGCCTG ATGGGTATCG GCCTGGTCAC TGCAGTGGTG
TCGATGGGCA TGGCCGCTGC CTTGGCGTTG TATATCCGCT GGCATTCGGC CTATGCCGCC
TACCCGCTGC GCAAGGGCCT GTCACGCCCA TCACTGGCGG CCCTGCGCGA GCTGTGGCGG
CTGGGCCTGC CGATTGGCGG TACCTACATG GTGGAAGTGG GCCTGTTCGC CTTCGCCGCG
CTGTGCATGG GCGTGCTGGG TAGCACCGAG TTGGCGGCGC ACCAGATTGC CCTGCAGATC
GTGTCCACGG CATTCATGGT GCCGACGGGC TTGTCCTATG CGGTGACCAT GCGCGTCGGC
CTGTACTACG GCGCTGGCAA CCTGCTGGCG GCGCGCAGCG CCGGGCGGGT GGGCATCGGG
TTCGGGGCCA TGATCATGTT TGCCTTCGCC GCCCTGTTCC TGCTGCTGCC CGAAGCACTG
GTAGGGCTGT TCATCGACCG TAATGACCCG GCCTTTGCCG CGATCTTCCA GGTGGCCGTG
CAGTTGTTGA TGGTGGCGGC GTGGTTCGAA CTGTTCGACG GCATGCAGAC GATTGCCATG
GGCTCGATCC GTGGGCTGAA AGATGCCAAG ACCACCTTCC TGATCGGGCT GGTGTGCTAT
TGGCTGGTGG GGGCGCCGAG TGCCTGGCTG TTCACCTTTA CGCTGGGCGG TGGTGCAGTA
GGGATCTGGT GGGGGCTGGC GCTGGGGCTG GCATGTGCGG CGGTGGCGCT GACCTTTGGC
TTTGAGTGGC GGATGAAGCG GTTGTTGGGG AAGGCTTGGG CTGCCGGGAA GGCGACGGCT
TCGGCCTGA
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| Protein sequence | MHVAPTTELK ALLRLAGPLI ASQLAHMLMV LTDTLMMARI SPQALAGGGL GAASYSFVSI
FCLGVIAAVG TLVAIRKGAN DIEGATRLAQ NGLWLAWALA LFAALVLWNL EPVLLLFGQK
PENVASAAEF LTLLPLALPG YLTFMALRGF TSALGRSTPV MVISLFGTVL NYLFNVALIE
GMFGLPKLGL MGIGLVTAVV SMGMAAALAL YIRWHSAYAA YPLRKGLSRP SLAALRELWR
LGLPIGGTYM VEVGLFAFAA LCMGVLGSTE LAAHQIALQI VSTAFMVPTG LSYAVTMRVG
LYYGAGNLLA ARSAGRVGIG FGAMIMFAFA ALFLLLPEAL VGLFIDRNDP AFAAIFQVAV
QLLMVAAWFE LFDGMQTIAM GSIRGLKDAK TTFLIGLVCY WLVGAPSAWL FTFTLGGGAV
GIWWGLALGL ACAAVALTFG FEWRMKRLLG KAWAAGKATA SA
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