Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_5108 |
Symbol | |
ID | 5194680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5742376 |
End bp | 5742930 |
Gene Length | 555 bp |
Protein Length | 184 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640589591 |
Product | hypothetical protein |
Protein accession | YP_001270410 |
Protein GI | 148550308 |
COG category | [S] Function unknown |
COG ID | [COG3079] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.217785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAATA CTCAATCGCC CTACAACGCT TTCGCCATGC TGCTCTCGAG CAATGGCCAT CCTGTCACCC CGGCCGAACT GCACGGCCTG CTGATTGGCC GCAGCTGCGC CGGCGCCGGC TTCGATGCCG ATGCCTGGTT GGCCGATGCC GCCCAACTGC TGGAAATCGA GCCTGGTGAC AGTGTCCGCA ACGCCTTGGT CGGCTTGCAG GAAATGGTCA AGGGCGAGCT GACCAGCGAC GACATGGCGA TCGTCCTGCT GCTGCCTACC GATGATGCTG CACTGAGCGA CCGCGCCACC GCGCTGGGCC AGTGGTGCCA GGGCTTCGTG ACCGGTTTCG GCCTGAACGC TGGCGGTAAG GACTTGTCCG ATGAGGCCAA GGAAGTGCTG CAGGACCTGG TGGCCATTTC GCAGGTCCAG GAAGCGCTCG AAGAGTCCGA AGACGGCGAG AGCGACTACA TGGAAGTCAT GGAATACCTG CGTGTGGCGC CCCTGCTGCT GTTCTCCGAA CTGGCCAAGC CGGCCGCACC CGCACCCAAG CCCTCGCTGC ACTGA
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Protein sequence | MPNTQSPYNA FAMLLSSNGH PVTPAELHGL LIGRSCAGAG FDADAWLADA AQLLEIEPGD SVRNALVGLQ EMVKGELTSD DMAIVLLLPT DDAALSDRAT ALGQWCQGFV TGFGLNAGGK DLSDEAKEVL QDLVAISQVQ EALEESEDGE SDYMEVMEYL RVAPLLLFSE LAKPAAPAPK PSLH
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