Gene Pput_5108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5108 
Symbol 
ID5194680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5742376 
End bp5742930 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content64% 
IMG OID640589591 
Producthypothetical protein 
Protein accessionYP_001270410 
Protein GI148550308 
COG category[S] Function unknown 
COG ID[COG3079] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.217785 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAATA CTCAATCGCC CTACAACGCT TTCGCCATGC TGCTCTCGAG CAATGGCCAT 
CCTGTCACCC CGGCCGAACT GCACGGCCTG CTGATTGGCC GCAGCTGCGC CGGCGCCGGC
TTCGATGCCG ATGCCTGGTT GGCCGATGCC GCCCAACTGC TGGAAATCGA GCCTGGTGAC
AGTGTCCGCA ACGCCTTGGT CGGCTTGCAG GAAATGGTCA AGGGCGAGCT GACCAGCGAC
GACATGGCGA TCGTCCTGCT GCTGCCTACC GATGATGCTG CACTGAGCGA CCGCGCCACC
GCGCTGGGCC AGTGGTGCCA GGGCTTCGTG ACCGGTTTCG GCCTGAACGC TGGCGGTAAG
GACTTGTCCG ATGAGGCCAA GGAAGTGCTG CAGGACCTGG TGGCCATTTC GCAGGTCCAG
GAAGCGCTCG AAGAGTCCGA AGACGGCGAG AGCGACTACA TGGAAGTCAT GGAATACCTG
CGTGTGGCGC CCCTGCTGCT GTTCTCCGAA CTGGCCAAGC CGGCCGCACC CGCACCCAAG
CCCTCGCTGC ACTGA
 
Protein sequence
MPNTQSPYNA FAMLLSSNGH PVTPAELHGL LIGRSCAGAG FDADAWLADA AQLLEIEPGD 
SVRNALVGLQ EMVKGELTSD DMAIVLLLPT DDAALSDRAT ALGQWCQGFV TGFGLNAGGK
DLSDEAKEVL QDLVAISQVQ EALEESEDGE SDYMEVMEYL RVAPLLLFSE LAKPAAPAPK
PSLH