Gene Pput_5079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_5079 
Symbol 
ID5193131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5706221 
End bp5706403 
Gene Length183 bp 
Protein Length60 aa 
Translation table11 
GC content60% 
IMG OID640589562 
Producthypothetical protein 
Protein accessionYP_001270381 
Protein GI148550279 
COG category[S] Function unknown 
COG ID[COG5583] Uncharacterized small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.215609 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.98479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCAT CTCTGCGTAG CATCGACGGT CAGGACGAAG CCACCATCTT GCGTGAAATC 
CAGAGCGCCT TGCGCGACCT GCGTTTCGGT GCGGTGGAGA TCACCGTGCA CAACGCTCAG
GTCGTACAGA TCGAGCGCAA GGAGAAGTTC CGCCTGCAAC AGCCCGGCAA CAAGCCCGGC
TGA
 
Protein sequence
MSASLRSIDG QDEATILREI QSALRDLRFG AVEITVHNAQ VVQIERKEKF RLQQPGNKPG