| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4953 |
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| Symbol | |
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| ID | 5191788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5572035 |
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| End bp | 5573297 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640589438 |
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| Product | type IV pilus secretin PilQ |
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| Protein accession | YP_001270257 |
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| Protein GI | 148550155 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGT GGATGAAATA CCTGCTGGCA ACCCTGCTGT CGATCCCGCT GGCTTCGGCG
ACGCCTTACC AGGGTGAACC CCTGTCGCTG AACTTCCAGG ATGTAGAGGT GCGTGCGGTG
CTGCAGGTGC TGGCTGACTA CGCCGGCGTC AACCTGGTTG CCAGTGATGC GGTACAAGGC
AGCGTCACTT TGCGTTTGCA GGACGTGCCG TGGGATCAGG CGCTCGACCT GGTGTTGCGC
AGCAAGGGCC TGTCCCGGCG CCAGGAGGGC AATGTGCTCT TGGTGGCGCC TGCGGCCGAG
TTTGCCGCGC AATCGGCAGA CGCCCGGGTG AGCCAAGTGC TGGACGCGCA GCTGCAGCCA
TTGCGTCGGG AGCTGCTGCC CATTCACCAC GCCAAGGCCG CCGATTTGGC GCAGTTGCTG
CTGGCAAGTC TGGAGGGTGG CGGCATCCCC ACGGGTAGCC TGAGTGTCGA TGAACGCACC
AATACGCTGG TGGTGTACCT GCCCGCTGAC CGCCTGGCCG AGATGCGCCA GTTGGTGGCG
CAGTTGGACG TGCCGGTGCG TCAGGTAGCG ATCGAGGCGC GTATCGTTGA GGCCAACGTC
GATTATGAGA AAAGCCTGGG GGTACGCTGG GGTGGGCCGC TGTACGGCGA GAAACTGCGG
CCCGGCAAGG AGCTGTTCGT CGACCTCGGT CTGGAGCGAG CCGGCAGCAG TATCGGCCTG
GGTTTGTTGC GCGGTGACGT GCTGCTGGAC CTGGAGCTCA GTGCCATGGA AAAAAGCGGC
AACGGCGAGA TCATTTCGCA GCCCAAGGTG GTCACGGCTG ACAAGGAAAC GGCGAGGATC
CTCAAGGGTA CCGAGGTGCC TTACCAGGAA ACCAGCCAAA GCGGCGCTAC CTCGGTATCG
TTTCGCGAAG CCTCGCTGTC GCTGGAAGTA ACGCCACAGA TCACTCCGGA CAACAAGGTG
ATCATGACCG TCCGGGTGAC CAAGGACGAG CCGGATTACG TCAATGCGTT GAACAACGTA
CCGCCGATCC GCAAGAACGA GGTCAATGCC AAGGTTCGTG TGGCTGACGG CGAAACGATC
GTGATCGGTG GCGTCTACTC GACTTCGCAA AACAATGTGG TCGACAAGGT GCCATTTTTC
GGCGATCTGC CGTATGTTGG GCGGCTGTTT CGACGCGATG CATTACAAGA GAAAAAATCC
GAGCTGCTGG TCTTCCTGAC TCCGCGTATC ATGAGTGACC AGGCGATTGC TGTGAGTCGT
TGA
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| Protein sequence | MKTWMKYLLA TLLSIPLASA TPYQGEPLSL NFQDVEVRAV LQVLADYAGV NLVASDAVQG
SVTLRLQDVP WDQALDLVLR SKGLSRRQEG NVLLVAPAAE FAAQSADARV SQVLDAQLQP
LRRELLPIHH AKAADLAQLL LASLEGGGIP TGSLSVDERT NTLVVYLPAD RLAEMRQLVA
QLDVPVRQVA IEARIVEANV DYEKSLGVRW GGPLYGEKLR PGKELFVDLG LERAGSSIGL
GLLRGDVLLD LELSAMEKSG NGEIISQPKV VTADKETARI LKGTEVPYQE TSQSGATSVS
FREASLSLEV TPQITPDNKV IMTVRVTKDE PDYVNALNNV PPIRKNEVNA KVRVADGETI
VIGGVYSTSQ NNVVDKVPFF GDLPYVGRLF RRDALQEKKS ELLVFLTPRI MSDQAIAVSR
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