Gene Pput_4927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4927 
Symbol 
ID5192391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5530342 
End bp5530596 
Gene Length255 bp 
Protein Length84 aa 
Translation table11 
GC content62% 
IMG OID640589412 
Productglutaredoxin 3 
Protein accessionYP_001270231 
Protein GI148550129 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0695] Glutaredoxin and related proteins 
TIGRFAM ID[TIGR02181] Glutaredoxin, GrxC family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.356634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCCTG TCATCGTCTA TTCCAGCGAC TACTGCCCCT ACTGCATGCG TGCCAAGTAC 
CTGCTCGAGA GCAAGGGCGT GGCCTTCGAG GAAATCAAGG TCGACGGCAA ACCGCAGGTT
CGCGCCGAGA TGAGTCAGAA AGCCGGCCGT ACGTCGGTGC CGCAGATCTG GATCGGCAGT
ACCCATGTCG GTGGATGCGA TGACCTCTAT GCCCTGGAGC GCGCGGGCAA GCTCGACGCG
TTGCTGGCGG CCTGA
 
Protein sequence
MKPVIVYSSD YCPYCMRAKY LLESKGVAFE EIKVDGKPQV RAEMSQKAGR TSVPQIWIGS 
THVGGCDDLY ALERAGKLDA LLAA