Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4910 |
Symbol | |
ID | 5193179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5510406 |
End bp | 5511770 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640589395 |
Product | N-formimino-L-glutamate deiminase |
Protein accession | YP_001270214 |
Protein GI | 148550112 |
COG category | [F] Nucleotide transport and metabolism [R] General function prediction only |
COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
TIGRFAM ID | [TIGR02022] formiminoglutamate deiminase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.508756 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGCCT ACTTCGCCGA ACGCGCCCTG CTACCTACGG GCTGGGCCAG CCATGTGCGT ATCGAGGTCG CCCGCGATGG CCGCGTGGCC AGCATCGAGC CTGGCGCTTC GGCCGAAGGC GCCGAGCGCC TGGCCGGCCC GCTGCTGCCC GGCATGCCCA ACTTGCACTC GCATGCCTTC CAGCGCGCCA TGGCAGGCCT GGCGGAAGTT GCCGGCAACC CCAATGACAG TTTCTGGACC TGGCGAGACC TGATGTACCG CCTGGTCGGG CAGATCAGTC CAGAGCAGCT TCAGGTCATC GCCCGCCAGC TGTACATCGA GATGCTCAAG GCCGGTTATA CCTCGGTGGC GGAGTTCCAC TACGTGCACC ACGACCAGGC CGGCAAGCCC TACGCCGACC CGGCCGAGCT GTCGCGACGC ATCAGCGCGG CCGCAGCCGA CAGCGGCATC GGCCTGACCT TGCTGCCGGT GCTGTACAGC CATGCAGGCT TTGGCGGCCA GGCGCCGAAC GACGGGCAGC GGCGCTTCAT CAACTCCACC GGGCAGTACC TGCAGCTGCA AGCCCAGCTC GCCCCGCTGC TGGCCGCGCA ACCGGCGCAG CAACTGGGCC TGTGCTTCCA CTCGCTGCGG GCGGTAACGC CTGGGCAGAT CGCCGAAGTG CTGGCGGCCA GCGACAGGCA GTGCCCGGTG CATATCCACA TCGCCGAACA GCAGAAGGAA GTCGACGACT GCCTGGCCTG GAGCGGCCTG CGCCCGCTGC AGTGGCTGTA CGAGCACGTG GACGTGGACC GCCGCTGGTG CCTGGTACAC GCTACCCATG CCGAACCGGA CGAAGTCACT GCCATGGCCC GCAGCGGCGC AGTGGCCGGG TTGTGCCTGA CCACCGAAGC CAACCTGGGC GATGGGATCT TCCCGGCAGT GGACTTCCTG GCACAGGGCG GACGTATGGG CATTGGTTCG GACAGCCATG TGTCGTTGAG CGTGGTGGAG GAGCTGCGCT GGCTGGAATA TGGCCAGCGC CTGCGGGACC AGCGGCGCAA CCGCCTGTAT CGCGGCGACC AACCGATGGT CGGGCGCACG CTGTATGACG CGGCGTTGGC CGGTGGTGCA CAGGCGCTGG GGCAGGCGGT CGGCGAGTTG GCGGTGGGCA AGCGTGCCGA CTGGCTGGTG CTCGATGGGC AGGACCCCTA CATCGCCATG GCGGAGGGTG ATGCCATTCT CAACCGTTGG CTGTTTGCCG GCGGCGATCG CCAGGTGCGC GATGTGATGG TGAATGGGCA CTGGGTGGTG CGCCAGGGGC GGCATGCGCA AGAAGAAGAA AGCGGGCGGG CGTTTGCCGA GGTGTTGCGC CAGCTTTTGG GCTGA
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Protein sequence | MSAYFAERAL LPTGWASHVR IEVARDGRVA SIEPGASAEG AERLAGPLLP GMPNLHSHAF QRAMAGLAEV AGNPNDSFWT WRDLMYRLVG QISPEQLQVI ARQLYIEMLK AGYTSVAEFH YVHHDQAGKP YADPAELSRR ISAAAADSGI GLTLLPVLYS HAGFGGQAPN DGQRRFINST GQYLQLQAQL APLLAAQPAQ QLGLCFHSLR AVTPGQIAEV LAASDRQCPV HIHIAEQQKE VDDCLAWSGL RPLQWLYEHV DVDRRWCLVH ATHAEPDEVT AMARSGAVAG LCLTTEANLG DGIFPAVDFL AQGGRMGIGS DSHVSLSVVE ELRWLEYGQR LRDQRRNRLY RGDQPMVGRT LYDAALAGGA QALGQAVGEL AVGKRADWLV LDGQDPYIAM AEGDAILNRW LFAGGDRQVR DVMVNGHWVV RQGRHAQEEE SGRAFAEVLR QLLG
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