| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4883 |
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| Symbol | |
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| ID | 5190755 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5476809 |
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| End bp | 5481569 |
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| Gene Length | 4761 bp |
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| Protein Length | 1586 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640589368 |
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| Product | hypothetical protein |
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| Protein accession | YP_001270187 |
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| Protein GI | 148550085 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.718638 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCTG CAGCAATCCC ACCCAGGCTG ACGTTCAAGC AACGCGTGGC AGCCTGTTTC
TCCAAACGAC CCAGCCTGCG GGACGTTTTA TCAAAAGAAG CATTCCAGAT TTTCAGCGAC
CGGTATCCAT GGGTGCACCG TAACCACCCT CACATCACAT CGCTCGATCC TTTCGTCATC
CTGCATGCAC CGGCCAGCAC CGATGACCTC TCACGTCAGA GCGGGCTGGT GGACGAGCTT
CTGAGGCATT TTCTGGCCAA GGAACGTGTG CAACTGGGCG CCGCAGACAG GCTGAGCATC
AGCCCTCCCC ATGTGTTTCA AATTCAGGAG CAAGACCAGG ACAACCTTCG CCAGCCCGAA
ATCATGCCGG ACCTGACAAA GCTCAACGAT GACTTCGATA CAGTGCTTGG CGCGTTGATA
CCCGCCTTCC AGCAAGCCCA GATCGGCTTC TGGAACGGGC TCGACGAAGA CAGCCAAGTC
TCGCGCATGC TCTGGCTGGA GCACACCATC AAGGCTGCCT TGCTCGAGAA CCTCCCTCGT
CAAGGCCTTG AAGATGATGC AAAAGCTGCA ATGTACGCCC TGCTCGACGG GGTACACGAC
AGCCTGACTG TCGAGGCGAT ACAAGTCACG CTCGGAACGG ATGGCGGGGC ACACACCGTT
ACCCTACCGG ATCTGTTGCT CATCACCACA AGCGGCACCC GCAGCCTGGT TCTGCAATGC
AAGCCCTGCG GTTCGGTTCA TCGCCATGTC GACCTGCCCA GCTTTGCCAC CGCGCTGCAA
CGGCAGCTAG CGCAACGCTA TCGCTTCGAA ACGTTGTCCT GGGCACACAC GCCAGTAATC
GGACGCCCTT TCGCCTTCCA GGTCAGGCAA CTGCTGAACG ATATCCTGGA CGACATCGGC
CGCCTGCGTA TTGGCGGCCT GACAACCGTC GACGAAATGG AGCGACAACT GCGCCAGGTG
AGCGACCCGT CAGCTTACTT CTTCGACCTG CCTTCGCAGG AACGAACTGC ACCCGCCGTC
AGTCCGCCGC GGTGGCTGCT CAATGCCAGC GCTGAGGACC GCTATGCCTA TCACACTGCA
CTGCTCGATC TGGCGGCGAA CCAAGGTCGG TCGAAGGGTC GCACATCGCT GGGCGATGTC
GAGGATATCC GTGATTACGC CGCTCGCCGC TTGCGTGAGA CCCTGCAGAC CAGCTACCCA
GACAAGGCGG TGCACGACCC GAACGAGGTG CACATCCGCA TTTCCCAAGC CATCATCGGC
GCCGGCACAC AAGGGCAGTC ACTGTTCTTG CGCACGGAGC CCCTGACCGA CCTGGCGATC
TCACGCCTGC GGCTGGAGGC TGGTGAGGTG ATAAGCGGGA TGAATTTCGA GGACGGCTCG
CCTGTGACCG ACTGGCTAAG CATCGACCAG ATCAGGGGCC TGATTCATCA GGTCGACATC
GGCGGTCACT ACCCCTCCTA CCTGAAGGAC CAAGTCAACA CCCAACCGCG CAGGGCCGAG
CGAATCCGGC AGCATGCCAG GGAATGGCGC GACGCCCTTC GGTTCAGCAC CCTGAAGGCC
AAGATCGAGC GACAACTTGG TGAAACGGCG AGCCAGGCAA TGCTCAGCTT CTGCCAGGGC
ATGGACAATG GCGCGGACCT TCTGCGCATC GCCCCCCTGG CGTTCCTTTG CGCGCCTGGC
GCTTCAGCAA GCGATGTGGC GCACGGGATG TTCATTATCG AAATACCGGC AAGCGGCACC
TGGGTCTTGT ACCGCCCCTT CTATGCCGAC AGGGCGTTGC AGGAATTTCC GACCCTCGAG
TTGCTGATGG ACGCAATCCG CAGCAGGGGC GAACTGCAAG AGAGCGTATT GGCCTGGCTC
GACGATGACG CGCGCCCGAT TTACCAGAAC GACGGGTTCA AGCACCCGCA CTTGCACCCG
AACATTAAAG CGCTGACGCA CCTGCTCAAT GTGCCGGTCG AGCTACTGGA CGGCCTTTTG
CAACGCCTCA GACGCCCGGT CCAGGTCTCG TTCGAGGCGT GGACGGAAGA TCTGGACACC
CACCTGTTCA ACGCGCGTAT CGAGACCATG TTATTGGCCT CAGCCAGCAA CAGCGTCTCC
AATGCTCAAG AAGTGCGGGC TTTGGTGAAG GAGGCTGCGT GGGCGATCTT CAATACCGTC
ACCCAACTTT GGCATGGCCC GATGACCACG CTGGTGTGGC TGGTGGTGGC GCTGTCGGCA
GCCAAGGAAG ACGTGGAGGC GCTGATCAAG CGCAGCGGTG ACAACAAGAT CGTCGCAGCC
ATAGACCTGA TCACCAACCT GGCCTTGCTC CTTGCCCACC GCCCTGCAAC GCCACCCACC
AACAGCGAAG AGGCCGCTAC GCTCCGTTTT TCAGGCCCTG CGCCGAAGGA AGATTCCCCG
CCGCCAGCGG TCGAGCAGCC ACAGGAGAAA CCCTGGCAGG CCCCCGTCGA GCCGCCGCCG
CCCAGGATCA TGCGGGTAAA TGCCTGGCGT GAGGAGCAGA GCCTGAGCAA GCTGTCGCCC
CAGGTGCGTC AGTCAATGGC CCAATTGCAG GCTTCGCAGC CGCTGGAAGG GCACGTGCCA
CTGGCTAAGG GCCGTCTGCG GGGGCTGTAC AGCATCGCCG GCCGGTACTA CGTCAAGCTC
GGCGATGACG CCTATGAGGT CATCGAGACC TGGAACGGCA TGCAGATCAT CGGGCCCGAG
CCGAGCAGCA GCGAATGGGT GTCGCAATGG AATGGCGACC CGGACGGTTA TCACATTGTG
GGTCGTGAAC GGCAAAAAGG GCCATGGCTT ACGCGCTGGC ATGAACAATG GACTTTGAAC
GTGAGCCTCT TTGGCGGCAT GCCAAAGGAC AGGCACACCA TCAACGCTGA AAACCGCCAA
CGGTTCGACA CGTTGAGCGC AACCGCCACG GCGAATCAAC AAATGCTTAA TCAGATGGCG
CCACTTATGG AACGCAGCCA AGTGCAACTG CAGGCTTATG ACGACCTCGC TATGGAGTAC
AGCATGGCTA TCGATGCACT GCCTGCACAG GAGCGCGCTT CACCACCGCC AGCATTGCAG
CTTCAGAGGC AGGCACTCAA AGCCCAACGC CTGCGCCATT TGCCGGAAAT CCGGGCATCC
GCGCTCTACC TGGAACGGCA GAGCACGCTG CTGCATGGAA ACATCGAAGT ATTCAAGGAG
ATGGCTGAAC CACGGTTCAG CAAATTCGAC ACCCGAGCCC CGAACCGACG GCGATACGGC
AATTGGTACG GTGCAGCCAT CGAAAACGAC ATGCTGCTGT GCCGCCGCCT GCTGGAGCAG
GTCGACCATC AGGCACTGAG CGCACAGGCC ATCGGGCTGC CCCGCTTTCC AGAGACAGCC
GAACAGATAC AGCAATACCT CGATTATCGT GAACGGGTAC GCGATTCCTG CCAGGCCAGC
CGCCGCCTGC TTGTCGTCAG CCAGCGGCTG GATCGGATCC TGGCGGAAAC ACTGCAGGAC
CCCAAGATCG ATTTTGCCAA TAAAGCCACG AAACTCGCTC AGACCATTCA ACGCAGGACG
TATTCGACGC TGGTCATTCG GGCCCAACTG CTCAGTGACC TGGCCTACCT CGCGGTGGAC
AAGTCTCGGC TCTCTGCGGA CACGGCCGAG CATTTGCTTG CAATGCGCGC GCCGCTCAGC
GGCATTGAAT TCAGCCGCAC GGTATGGAGC CACGACGGCC TGGCAGCCAC CGAAGAGACG
GCCCAGGTCA AAGCCGAACT GCTTGAGGAT ATCCTTCAGA AATACCGTAC CGTGCTGGAC
CGCGCCCAAT ACATGAAGAC GTTGGACTCC CCTGCGCTGG TGGCTGACGT GCTGGACGAA
TACATACGCG AACTGTCCAC GATCACCCAG ATCACGGAGC AGCAACTGAG CGCGAGCTTG
ACCAACCTCG ACAGCGGCAT CAGTCCCCCC TCGCCAGCGC CCTACCATCG CCCGGCAACG
ATCAGGCGCC GGGTCATCCG TGTCGACCGA GGTCGACCGT TGCTGGTGGA AATCGACCAA
ATGGGCAACC GGGCCATCCA GCGCAGTGCA TTCAATCAGG AGCCTGCGGG CAGCTTCGCT
CAACGCGACG GGGTGTGGCA TGCCGTGCCT GAGCAAGCGC GGCCGGCCCC GCGCGACCGG
GCACAGCTTC GCCAGCGAGC AAACCGCCTG CTGGCAGAGG TGGATGGAAA AATCGCCTTC
GCCGCTCACT ATGCCGATGA GCCCAACAGC CTGAGCGACT TCCTGGAATG GCCGGCCGGT
GACATGCGCG AAGTTCAGCA GCAACTGACC GAGCTGAACA ACCCACTGGA TTCCAGCTTG
GTCGACCTCC TTCGGGCAGC CGTAGACCGC GTCCATCACG AAAGGCTTCG GCTGCTCACC
GACGCGTATC TGAACACCCG CCATCCCGAC GGCAAGGCCC TTCGTTTCCT GGCTGAGCAG
AAGCGGATTC GTGTCAGGCA GACCGTGATT CGCCGGCAGC TACGTCACGC CAATGATTAC
CTCGACGTCT ACGAGATTCG CGATGTGCAA GCGCCACAGC GGCTACTGTG GGAGGCGCAC
TTTCATTATT CCAGCCTCGA AGCGAGAGGG CATGACTTCG TCAAGGGCCA CCTCAAGTTC
TGGGATGCAG GTGTAAGGGG CCGCAAGGCC ATGCTCGAGC AGGCCGCAGA CGCACGCGAG
CGCATCGCGA TCTACCGCGG CGATCTGCGC CTGGAGCAGG TGATTGGCAT CATTCCTTTC
CCGGCGGACG CGCCGCAGTA G
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| Protein sequence | MTAAAIPPRL TFKQRVAACF SKRPSLRDVL SKEAFQIFSD RYPWVHRNHP HITSLDPFVI
LHAPASTDDL SRQSGLVDEL LRHFLAKERV QLGAADRLSI SPPHVFQIQE QDQDNLRQPE
IMPDLTKLND DFDTVLGALI PAFQQAQIGF WNGLDEDSQV SRMLWLEHTI KAALLENLPR
QGLEDDAKAA MYALLDGVHD SLTVEAIQVT LGTDGGAHTV TLPDLLLITT SGTRSLVLQC
KPCGSVHRHV DLPSFATALQ RQLAQRYRFE TLSWAHTPVI GRPFAFQVRQ LLNDILDDIG
RLRIGGLTTV DEMERQLRQV SDPSAYFFDL PSQERTAPAV SPPRWLLNAS AEDRYAYHTA
LLDLAANQGR SKGRTSLGDV EDIRDYAARR LRETLQTSYP DKAVHDPNEV HIRISQAIIG
AGTQGQSLFL RTEPLTDLAI SRLRLEAGEV ISGMNFEDGS PVTDWLSIDQ IRGLIHQVDI
GGHYPSYLKD QVNTQPRRAE RIRQHAREWR DALRFSTLKA KIERQLGETA SQAMLSFCQG
MDNGADLLRI APLAFLCAPG ASASDVAHGM FIIEIPASGT WVLYRPFYAD RALQEFPTLE
LLMDAIRSRG ELQESVLAWL DDDARPIYQN DGFKHPHLHP NIKALTHLLN VPVELLDGLL
QRLRRPVQVS FEAWTEDLDT HLFNARIETM LLASASNSVS NAQEVRALVK EAAWAIFNTV
TQLWHGPMTT LVWLVVALSA AKEDVEALIK RSGDNKIVAA IDLITNLALL LAHRPATPPT
NSEEAATLRF SGPAPKEDSP PPAVEQPQEK PWQAPVEPPP PRIMRVNAWR EEQSLSKLSP
QVRQSMAQLQ ASQPLEGHVP LAKGRLRGLY SIAGRYYVKL GDDAYEVIET WNGMQIIGPE
PSSSEWVSQW NGDPDGYHIV GRERQKGPWL TRWHEQWTLN VSLFGGMPKD RHTINAENRQ
RFDTLSATAT ANQQMLNQMA PLMERSQVQL QAYDDLAMEY SMAIDALPAQ ERASPPPALQ
LQRQALKAQR LRHLPEIRAS ALYLERQSTL LHGNIEVFKE MAEPRFSKFD TRAPNRRRYG
NWYGAAIEND MLLCRRLLEQ VDHQALSAQA IGLPRFPETA EQIQQYLDYR ERVRDSCQAS
RRLLVVSQRL DRILAETLQD PKIDFANKAT KLAQTIQRRT YSTLVIRAQL LSDLAYLAVD
KSRLSADTAE HLLAMRAPLS GIEFSRTVWS HDGLAATEET AQVKAELLED ILQKYRTVLD
RAQYMKTLDS PALVADVLDE YIRELSTITQ ITEQQLSASL TNLDSGISPP SPAPYHRPAT
IRRRVIRVDR GRPLLVEIDQ MGNRAIQRSA FNQEPAGSFA QRDGVWHAVP EQARPAPRDR
AQLRQRANRL LAEVDGKIAF AAHYADEPNS LSDFLEWPAG DMREVQQQLT ELNNPLDSSL
VDLLRAAVDR VHHERLRLLT DAYLNTRHPD GKALRFLAEQ KRIRVRQTVI RRQLRHANDY
LDVYEIRDVQ APQRLLWEAH FHYSSLEARG HDFVKGHLKF WDAGVRGRKA MLEQAADARE
RIAIYRGDLR LEQVIGIIPF PADAPQ
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