| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4879 |
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| Symbol | |
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| ID | 5191097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5472993 |
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| End bp | 5474675 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640589364 |
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| Product | poly(R)-hydroxyalkanoic acid synthase, class II |
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| Protein accession | YP_001270183 |
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| Protein GI | 148550081 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01839] poly(R)-hydroxyalkanoic acid synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.55186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGACA AACCGGCCAA AGGATCGACA ACGCTCCCCG CCACCCGCAT GAACGTGCAG
AACGCCATCC TCGGCCTGCG CGGCCGCGAC CTGCTTTCCA CGCTGCGCAA CGTCGGCCGC
CACGGCCTGC GCCACCCGCT GCATACCGCG CATCATCTGC TGGCGCTTGG CGGGCAGTTG
GGGCGGGTGA TGCTGGGGGA CACGCCCTAC CAGCCGAACC CGCGTGACGC ACGCTTCAGT
GACCCGACCT GGAGCCAGAA CCCGTTCTAC CGCCGCGGCC TGCAGGCCTA TCTGGCCTGG
CAGAAGCAGA CACGCCAGTG GATCGATGAA AGCCATTTAA ACGACGATGA TCGAGCCCGC
GCCCACTTCC TGTTCAACCT GATCAACGAT GCGCTGGCGC CCAGCAACTC ACTGCTCAAT
CCGCTGGCGG TCAAGGAGCT GTTCAACACC GGCGGCCAGA GCCTGGTGCG CGGCGTGGCC
CACCTGCTCG ACGACCTGCG TCACAACGAT GGGCTGCCGC GTCAGGTGGA CGAGCGCGCC
TTCGAAGTAG GCGCCAACCT GGCGGCGACC CCTGGCGCAG TGGTATTTCG CAACGAGCTG
CTGGAGCTGA TCCAGTACTC GCCGATGAGC GAAAAGCAGC ACGCACGCCC ACTGCTGGTC
GTGCCGCCTC AGATCAACAA GTTCTACATC TTCGACCTCA GCGCTACCAA CAGCTTTGTC
CAGTACATGC TCAAAAGCGG CTTGCAGGTG TTCATGGTCA GCTGGCGCAA CCCCGACCCA
CGCCACCGTG AATGGGGCCT TTCCAGCTAC GTGCAAGCCC TGGAGGAAGC GCTTAATGCC
TGCCGCAGTA TCAGCGGCAA CCGCGACCCC AACCTGATGG GCGCCTGTGC CGGTGGCCTG
ACCATGGCCG CACTGCAAGG CCACCTGCAA GCCAAGCAGC AATTGCGCCG GGTACGCAGT
GCCACCTACC TGGTCAGCTT GCTGGACAGC AAGTTCGAAA GCCCGGCCAG CCTGTTCGCC
GATGAGCAGA CCATCGAAGC GGCCAAGCGC CGCTCTTATC AGCGCGGCGT GCTGGACGGT
GGCGAAGTGG CGCGGATCTT CGCCTGGATG CGGCCCAACG ACCTGATCTG GAACTACTGG
GTCAACAACT ACCTGCTCGG CAAGACACCG CCGGCGTTCG ACATCCTGTA CTGGAATGCC
GACAGCACGC GCCTGCCCGC CGCGCTGCAT GGCGACCTGC TGGAGTTTTT CAAGCTCAAC
CCCTTGACCT ACGCGTCCGG GCTGGAGGTG TGCGGTACCC CGATTGACCT GCAGCAGGTC
AATATCGACA GCTTTACCGT GGCCGGCAGC AACGACCACA TCACGCCATG GGACGCGGTG
TACCGCTCGG CCTTGCTGCT GGGTGGCGAA CGGCGCTTCG TGCTGGCCAA CAGCGGGCAT
ATCCAGAGCA TCATCAACCC GCCAGGCAAC CCCAAGGCCT ACTACCTGGC CAACCCCAAG
CTGAGCAGCG ACCCACGCGC CTGGTTCCAC GACGCCAAGC GCAGTGAAGG CAGCTGGTGG
CCGTTGTGGC TGGAGTGGAT CACCGCACGC TCCGGCCTGC TCAAGGCACC GCGCACTGAA
CTGGGCAACG CCACTTACCC ACCGCTAGGC CCCGCGCCAG GCACCTACGT GCTGACCCGA
TGA
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| Protein sequence | MKDKPAKGST TLPATRMNVQ NAILGLRGRD LLSTLRNVGR HGLRHPLHTA HHLLALGGQL
GRVMLGDTPY QPNPRDARFS DPTWSQNPFY RRGLQAYLAW QKQTRQWIDE SHLNDDDRAR
AHFLFNLIND ALAPSNSLLN PLAVKELFNT GGQSLVRGVA HLLDDLRHND GLPRQVDERA
FEVGANLAAT PGAVVFRNEL LELIQYSPMS EKQHARPLLV VPPQINKFYI FDLSATNSFV
QYMLKSGLQV FMVSWRNPDP RHREWGLSSY VQALEEALNA CRSISGNRDP NLMGACAGGL
TMAALQGHLQ AKQQLRRVRS ATYLVSLLDS KFESPASLFA DEQTIEAAKR RSYQRGVLDG
GEVARIFAWM RPNDLIWNYW VNNYLLGKTP PAFDILYWNA DSTRLPAALH GDLLEFFKLN
PLTYASGLEV CGTPIDLQQV NIDSFTVAGS NDHITPWDAV YRSALLLGGE RRFVLANSGH
IQSIINPPGN PKAYYLANPK LSSDPRAWFH DAKRSEGSWW PLWLEWITAR SGLLKAPRTE
LGNATYPPLG PAPGTYVLTR
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