| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4877 |
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| Symbol | |
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| ID | 5191028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5470350 |
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| End bp | 5472029 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640589362 |
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| Product | poly(R)-hydroxyalkanoic acid synthase, class II |
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| Protein accession | YP_001270181 |
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| Protein GI | 148550079 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01839] poly(R)-hydroxyalkanoic acid synthase, class II |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0803313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.266317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACA AGAACAACGA TGAGCTGCAG CGGCAGGCCT CGGAAAACAC CCTGGGGCTG
AACCCGGTCA TCGGCATCCG CCGCAAGGAC CTGTTGAGCT CGGCACGCAC CGTGCTGCGC
CAGGCCGTGC GCCAACCGCT GCACAGCGCC AAGCATGTGG CTCACTTTGG CCTGGAGCTG
AAGAACGTGT TGCTGGGCAA ATCCAGCCTG GCCCCGGACA GCGACGACCG TCGCTTCAAT
GATCCGGCCT GGAGCAACAA CCCGCTGTAC CGCCGCTACC TGCAAACCTA CCTGGCCTGG
CGCAAGGAGC TGCAGGACTG GGTCAGCAGC AGCGACCTGT CCCCCCAGGA CATCAGCCGC
GGCCAGTTCG TCATCAACCT GATGACCGAG GCCATGGCGC CGACCAATAC CCTGTCCAAC
CCGGCTGCGG TCAAACGCTT CTTCGAAACC GGCGGCAAGA GCCTGCTCGA TGGCCTGTCC
AACTTGGCCA AGGACATGGT CAATAACGGC GGCATGCCCA GCCAGGTGAA CATGGATGCC
TTCGAAGTGG GCAAGAACCT GGGCACCAGC GAAGGCGCGG TGGTGTACCG CAACGATGTG
CTGGAACTGA TCCAGTACAG CCCCATCACC GAGCAGGTGC ATGCCCGCCC GCTGCTGGTG
GTGCCACCGC AGATCAACAA GTTCTACGTG TTCGACCTCA GCCCGGAAAA GAGCCTGGCG
CGCTTCTGCC TGCGCTCGCA GCAGCAGACC TTCATCATCA GCTGGCGCAA CCCGACAAAG
GCCCAGCGCG AGTGGGGCCT GTCCACCTAC ATCGATGCGC TGAAAGAAGC CGTCGACGCG
GTACTGGCGA TTACCGGCAG CAAAGACTTG AACATGCTCG GTGCCTGCTC CGGCGGCATC
ACCTGTACCG CACTGGTGGG CCACTATGCC GCCATTGGCG AGAACAAGGT CAACGCCCTG
ACCCTGCTGG TCAGCGTGCT GGACACCACC ATGGACAACC AGGTTGCATT GTTTGTCGAC
GAGCAGACCT TGGAGGCCGC CAAGCGCCAC TCTTATCAGG CGGGCGTGCT GGAAGGCAGC
GAAATGGCCA AGGTGTTCGC CTGGATGCGC CCCAACGACC TGATCTGGAA TTACTGGGTT
AACAACTACC TGCTGGGCAA TGAGCCCCCC GTGTTCGACA TCCTGTTCTG GAACAACGAC
ACCACGCGCC TGCCGGCCGC CTTCCACGGC GACCTGATCG AAATGTTCAA GAGCAACCCG
CTGACCCGCC CCGATGCCCT GGAAGTGTGT GGCACCGCGA TCGACCTGAA ACAGGTCAAA
TGCGACATCT ACAGCCTCGC CGGCACCAAC GACCACATCA CCCCATGGCC GTCATGCTAC
CGCTCGGCAC ATCTGTTCGG TGGCAAGATC GAATTCGTAC TGTCCAACAG CGGGCATATC
CAGAGCATCC TCAACCCGCC GGGCAACCCG AAGGCACGTT TCATGACCGG TGCCGACCGC
CCGGGGGACC CGGTGGCCTG GCAGGAAAAC GCCACCAAGC ATGCAGACTC CTGGTGGTTG
CACTGGCAAA GTTGGCTGGG CGAGCGTGCC GGCGCGCTGA AAAAGGCACC GACCCGCCTG
GGCAACCGTG CCTACGCCGC CGGCGAAGCC TCCCCAGGCA CCTACGTTCA CGAGCGTTGA
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| Protein sequence | MSNKNNDELQ RQASENTLGL NPVIGIRRKD LLSSARTVLR QAVRQPLHSA KHVAHFGLEL
KNVLLGKSSL APDSDDRRFN DPAWSNNPLY RRYLQTYLAW RKELQDWVSS SDLSPQDISR
GQFVINLMTE AMAPTNTLSN PAAVKRFFET GGKSLLDGLS NLAKDMVNNG GMPSQVNMDA
FEVGKNLGTS EGAVVYRNDV LELIQYSPIT EQVHARPLLV VPPQINKFYV FDLSPEKSLA
RFCLRSQQQT FIISWRNPTK AQREWGLSTY IDALKEAVDA VLAITGSKDL NMLGACSGGI
TCTALVGHYA AIGENKVNAL TLLVSVLDTT MDNQVALFVD EQTLEAAKRH SYQAGVLEGS
EMAKVFAWMR PNDLIWNYWV NNYLLGNEPP VFDILFWNND TTRLPAAFHG DLIEMFKSNP
LTRPDALEVC GTAIDLKQVK CDIYSLAGTN DHITPWPSCY RSAHLFGGKI EFVLSNSGHI
QSILNPPGNP KARFMTGADR PGDPVAWQEN ATKHADSWWL HWQSWLGERA GALKKAPTRL
GNRAYAAGEA SPGTYVHER
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