Gene Pput_4845 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4845 
Symbol 
ID5190950 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5434588 
End bp5434974 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content60% 
IMG OID640589330 
Producthypothetical protein 
Protein accessionYP_001270149 
Protein GI148550047 
COG category[S] Function unknown 
COG ID[COG3686] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.126737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.62859 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTG CCCTGTGGTG CATCCTGATT GCCCTGCTGT TGAACCCGCT TTGTGCCTTG 
ATCGCCAAGG CGAGCAGTGG CCGCTTCGGC CTCAAGGACA ATCACGATCC GCGAGCCTTC
CTCGATACCT TGTCGGGCCT GCCACGGCGT GCCCATGCTG CGCAGCAGAA TGGCTACGAA
GCGTTTCCGG CATTTGCTGC GGCGGTGCTT GTGGCGGATA TCGTCGGCAA TGCCGAGCAG
GTGACCCAGG ATGTACTGGG GGTGATGTAT ATCACCAGCC GCTTGCTTTA CATCATCTGC
TACCTGGCCG ACTGGGCTGC CTTGCGGTCG CTGGTGTGGC TTGCCGGCTT GGCACTGATC
GTGTCGTTCT TCGTGGTTTC CATCTGA
 
Protein sequence
MTVALWCILI ALLLNPLCAL IAKASSGRFG LKDNHDPRAF LDTLSGLPRR AHAAQQNGYE 
AFPAFAAAVL VADIVGNAEQ VTQDVLGVMY ITSRLLYIIC YLADWAALRS LVWLAGLALI
VSFFVVSI