| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4810 |
|---|
| Symbol | |
|---|
| ID | 5194033 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 5389090 |
|---|
| End bp | 5390181 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640589295 |
|---|
| Product | glycosyl transferase, group 1 |
|---|
| Protein accession | YP_001270114 |
|---|
| Protein GI | 148550012 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCG TCAATATGAT GTGGGCGGGT GGAACGCCTT ACATGTCCAT CCACAAAGTG
CACCGGCAGG TTTTGTCGAA CGCGGGTGCC GATGCCCGGA TCAGTAACTG GCTGCTGCTG
GGGAGCGGGC TCTGCTGTGG GCTCGGCTCG ACCCGGGAAT GGCATATGCC CTCACGTGCG
CTCAAAGGGC GGCACTTGTG GCGCTTGCTG CGTCCGTGGC TGCGCCTGCG CTTGCGCAAG
GCTTTGGCCG AGGCCGGGGC AGAAGTGGTG CTGCTCGACG GTATTGGTGT CGCCCGGTTG
GTGCTGCCGT TGTTGCAGCG CATCGCGCAC GTGCGTGCAA AGGTACTGTT CCATGGCAAG
ACGCGTCTGC ATGCCAGCGA TATCCGCTTG TTGCAGATGT TTCCGTCCGA GCGTCTGAGT
ATCGCGGCGG TATCACAGAC GTTGGCCGAG TCGCTGGAGC GTGACCTGGG CAGGCCGGTG
CAGACGCTGC GCATGGCGCT CGACCCGCTT GCATTCGTCG AGCCTTTGCT GAGCCGGGAC
CAGGCCAGGC AGGCGCTGAA GTTGCCTCAG GGCGCCGAGG TGATGCTGGG TGCGGTAGGG
CGACTGGTAG AGAGCAAAGG CTTCGAAATG CTGATCGAGG CATTCGCCAG AGCCAGTGCA
CGGCAACCCG GCTTGCAGCT GGCGATCATT GGCGAGGGGC CGCAGCATGC CGTGCTGCAG
CAGCGTATCG ACGCGTTGGG CCTGGCCGAG CGTGTTCATC TGCGCGGTCA CCGCGAAGAC
CTGCAGCAGC TGTATCGGGC ATTCGACTGG CTATTGGTAC CTTCGCGTTC CGAAGGCCTG
GGGCTGGTGG TGCAAGAGGC GGTGATGGCC GATGTACCGG TGGTGTGCAG CGACCTTGAA
GTGTTTCGCG AGCAGTTGCG CGACACGGGT GGCTACCTGC CGGTTGCCGA CGAAAGCGCC
TGGGCTGAGG CGATCGAGCG CTGTACGGCG CTCAGTGCCT CCACGATCGC CGCGAAGCAG
CGCCAGGCAC TGGCACCGGA GCAGGCCTGG CAGGCGTTCT GCAGCGGCTC GCAGAGCCTG
TTGCGCAGCT GA
|
|---|
| Protein sequence | MNIVNMMWAG GTPYMSIHKV HRQVLSNAGA DARISNWLLL GSGLCCGLGS TREWHMPSRA
LKGRHLWRLL RPWLRLRLRK ALAEAGAEVV LLDGIGVARL VLPLLQRIAH VRAKVLFHGK
TRLHASDIRL LQMFPSERLS IAAVSQTLAE SLERDLGRPV QTLRMALDPL AFVEPLLSRD
QARQALKLPQ GAEVMLGAVG RLVESKGFEM LIEAFARASA RQPGLQLAII GEGPQHAVLQ
QRIDALGLAE RVHLRGHRED LQQLYRAFDW LLVPSRSEGL GLVVQEAVMA DVPVVCSDLE
VFREQLRDTG GYLPVADESA WAEAIERCTA LSASTIAAKQ RQALAPEQAW QAFCSGSQSL
LRS
|
|---|
| |