| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4801 |
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| Symbol | |
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| ID | 5191937 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5379338 |
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| End bp | 5380228 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640589286 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001270105 |
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| Protein GI | 148550003 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0716178 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGAGC AGTGGAACCT TGAACAATTG CGTACCTTTC TGCGCGTTGC AGAATTGCGC
TCGTTCTCCG CGGTGGCACG TGAGCAGCAC AAAGCCCAGT CGGCGATCAG CAGTGCCATC
GCGCTGCTCG AAACCGACCT AGGGGTCACC CTGTTCGAGC GCAGCAGCGG CCGGCAACCG
AAATTGACTG AAAACGGCAG CGCCTTGCTG GAAGACGCCC GCGAATTGTT ACGCCAGTGC
GAACGCCTGG ATGGCCGCGC CCTGGCCCTG ATGCGCGGGC AGGAGGCCTT GCTGCGGGTC
GCGCAGGACG AAGCCATGCC GTATCAGCCG GTGATCGACA GCCTTGACGA ACTGGCTAGC
CGCTACCCGT TCCTGGAGGT GCAACTGGCC AGCGGGGCCC AGGGCGATGT GGCGCGCAAG
CTGGTGGAGC GGCGCGCCGA TCTGGGCCTG TTCTTCCTAC ACGAAAGCAT CCCGGCTTCC
TTGGAACGCC GTGCCTTGGG CAGCGTGGAG ATGGTCACGG TGTGCGCGGT CGGCCACCCG
CTGGCGGGCG AAGGCCGGGT CACCCGCCAA CAATTGGCCC GCCACCGGCA GTTGCTGATC
ACGCCACAAC AAAGCGGTTA CCCTGGCGGC GAGGCGATCA GCCCGCAGGT ATGGCGTGCC
GACAGCTTCT ACGCCATGGC CGAACTACTG ATGCGTGGCT TGGGCTGGGC CTGGTTACCC
CGGCATGTGG TGCAGTACCC GACCTACCAG GCGCACATGG TCGAACTGGA CAGCGATTGG
CGGCCGCCGG CCTTGGTGGC AGAGCTGGCC TGGCGCCGCG ATGAACCTCT GGGCCCGGCC
GCGCAGTGGC TGGCCGAGCG CTTTGCAGTG CACCTTCGCG CGATCGGGTA G
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| Protein sequence | MAEQWNLEQL RTFLRVAELR SFSAVAREQH KAQSAISSAI ALLETDLGVT LFERSSGRQP
KLTENGSALL EDARELLRQC ERLDGRALAL MRGQEALLRV AQDEAMPYQP VIDSLDELAS
RYPFLEVQLA SGAQGDVARK LVERRADLGL FFLHESIPAS LERRALGSVE MVTVCAVGHP
LAGEGRVTRQ QLARHRQLLI TPQQSGYPGG EAISPQVWRA DSFYAMAELL MRGLGWAWLP
RHVVQYPTYQ AHMVELDSDW RPPALVAELA WRRDEPLGPA AQWLAERFAV HLRAIG
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