| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4743 |
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| Symbol | |
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| ID | 5192775 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5310115 |
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| End bp | 5311416 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640589226 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_001270047 |
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| Protein GI | 148549945 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.127702 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.000000177935 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGATTG CCAAAATTGC CTCTGCCTCT GAAACCAAAG GTTTCGATAT CAAGCGCAGC
CTGCTCGAGA CCATCGTTGC CGGCTTGCTG GCGCTGATTG TCTTCGGCCC GATCGTCGGC
GTGGTGCTCG ACGGTTATAC CTTCAACGCC GAACCTCGTC GGGTTGCCTG GCTGGTCGGC
GGGGTGATGC TCGGGCGTTT CCTGCTCAGC CTGTACGTGC AGACCGCTGC CGGGCGGCGC
ATGCTCGAGG GCTTCGACAG TGGCGGCTCG GGCGTGCATG TGCGCGCGCC GAACTATGTG
TCGCGGCTAC GCTACATCAT CCCGGCGCTG GTGGTGATTG CCATCGTCTT CCCGATTTTC
GCCAACAAGT ACCTGCTGAC TGTGGTCATT CTTGGCCTGA TCTACGTACT GCTGGGCCTG
GGCCTGAACA TCGTGGTGGG CCTGGCCGGC CTGCTCGACC TGGGTTATGT AGCGTTCTAC
GCCATCGGTG CCTACGGCCT GGCGCTGGGG TACCAGTACC TTGGCCTGGG CTTCTGGAGC
GTGCTGCCCC TGGCGGCCAT CGCGGCGGCG TTGGCGGGGT GCATCCTAGG CTTCCCGGTG
CTCCGGATGC ACGGTGACTA CCTGGCGATC GTGACCCTGG GCTTTGGCGA AATCATTCGC
CTGGTGCTGA ACAACTGGCT GTCGTTCACC GGTGGCCCCA ACGGCATGCC GGCGCCATCG
CCAACCTTCT TCGGCCTGGA GTTCGGCCGC CGCGCCAAGG ACGGTGGGGT GCCGATCCAT
GAGTTCTTCG GCTTCGAATA CAACGCCAAC CTCAAGTTCG TGTTCATCTA TGCGGTGCTG
TTCATGGTCG TGCTGGCGGT GCTGTACATC AAGCACCGCC TGACCCGCAT GCCGGTCGGC
CGGGCCTGGG AAGCGCTGCG CGAAGACGAG ATCGCGTGCC GTTCGATGGG CCTGAACCAC
GTATTGGTCA AGCTCTCGGC GTTTACCCTT GGCGCCTCTA CCGCCGGCCT GGCCGGGGTG
TTCTTTGCCA CCTACCAGGG TTTCGTCAAC CCGTCTTCAT TCACCTTCTT CGAGTCGGCG
TTGATCCTCG CCATTGTCGT ACTGGGGGGT ATGGGCTCGA CCGTGGGCGT GGTCATTGCG
GCGTTCGTGC TGACCGTGGC GCCAGAGCTG CTGCGCAGCT TCTCCGAATA CCGGGTGCTG
CTGTTCGGCG TGCTGATGGT GCTGATGATG ATCTGGCGAC CGCGTGGGCT GATCCGCATC
AGCCGTACCG GTGTGACCCC GCGTAAAGGA GTGGCGCCAT GA
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| Protein sequence | MSIAKIASAS ETKGFDIKRS LLETIVAGLL ALIVFGPIVG VVLDGYTFNA EPRRVAWLVG
GVMLGRFLLS LYVQTAAGRR MLEGFDSGGS GVHVRAPNYV SRLRYIIPAL VVIAIVFPIF
ANKYLLTVVI LGLIYVLLGL GLNIVVGLAG LLDLGYVAFY AIGAYGLALG YQYLGLGFWS
VLPLAAIAAA LAGCILGFPV LRMHGDYLAI VTLGFGEIIR LVLNNWLSFT GGPNGMPAPS
PTFFGLEFGR RAKDGGVPIH EFFGFEYNAN LKFVFIYAVL FMVVLAVLYI KHRLTRMPVG
RAWEALREDE IACRSMGLNH VLVKLSAFTL GASTAGLAGV FFATYQGFVN PSSFTFFESA
LILAIVVLGG MGSTVGVVIA AFVLTVAPEL LRSFSEYRVL LFGVLMVLMM IWRPRGLIRI
SRTGVTPRKG VAP
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