| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4708 |
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| Symbol | |
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| ID | 5193270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 5275450 |
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| End bp | 5276661 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640589191 |
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| Product | precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit |
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| Protein accession | YP_001270012 |
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| Protein GI | 148549910 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2241] Precorrin-6B methylase 1
[COG2242] Precorrin-6B methylase 2 |
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| TIGRFAM ID | [TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.607345 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACCCT GGCTGACAGT AGTAGGCATC GGCGAAGACG GCTTCAGCGG CCTGGGCAAA
CAGGCCCGGC GCGCCCTGCT GGGCGCTGGG CGGGTCTTCG GCAGCCCACG CCAGCTGGCC
TTGCTGCCAC GTTGCGTGAC CGCGGAACAG CTGGCCTGGC CCAGCCCGTT CTCGCTGGCC
CCGGTGCTGG CCCTTCGCGG CGAGCCGGTG TGCGTGCTGG CCAGCGGTGA CCCTATGTTC
TACGGCGTCG GTGCCAGCCT GGCGCGCCAG GTGCCTGCTG CAGAAATGCG CGTGCTGTCG
ATGCCCTCTT CCTGCGCCCT GGCCGCTGCC CGCCTGGGCT GGCCGCTGCA GGACCTGCAG
GTGGTGTCGC TGGTGGCCCG CCCCCTGGCA GCGCTCAATG CCCACTTGCA CAGCGGCATG
CGCCTGCTGG TGCTGAGCAA CGATGGCGAC AGCCCGGCGG CAATTGCCGC GCAGCTGCGC
GGGCAAGGCT TCGGCCCAAG CCGCCTGCAG GTGTTCGAGC ACTTGGGGGG CGTGGACGAA
CGTGCACTGG CCGGAACCGC CCAGGACTGG CCGCACACCG GTATCGCGGC GCTCAACCTG
GTCGCCGTCG AATGCCTGGC TACGCCCGAT GCGCCCCGCC TGCACCGACT GGCCGGGCTG
CCAGACGCCG CATACCGGCA CGATGGCCAG TTGACCAAGC GCGATGTCCG CGCCATCACC
CTGGCGCGCC TGGCACCGCA ACCCGGCGAA CTTTTGTGGG ATGTCGGTGC GGGCTGCGGC
TCGATCGGCA TCGAATGGAT GCGTGCCCAC CCGGCATGCC GCGCGCTGGC CATCGAGGCC
GACGAAGGCC GCCAGGGTTT GATCGAGCAT AACCGCGATG CATTGGGTGT ACCCGGTCTG
CAACTGGTTC GCGGCAAAGC GCCAGCGGCG CTGCAAGGCC TGGAGCAACC GGATGCAATC
TTCATCGGAG GCGGCGTTAC CCGCGCAGGT GTACTGGACC TGTGCTGGGC AAGCCTGCGC
CCCGGCGGCC GCCTGGTGGC CAACGCCGTC ACCCTGCAAA GCGAACTGGC CCTGGCGCAC
TTTCGCGAAC AGCACGGTGG TGAGCTGACC CGTATCCATG TCGCTCATGC CCAGCCCTTG
GGTGCGTTCG ACACCTGGCG CCAGGCGCTG CCGATCACCC TTCTGGAAGT ACTGAAACCC
GCCGATGCGT GA
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| Protein sequence | MTPWLTVVGI GEDGFSGLGK QARRALLGAG RVFGSPRQLA LLPRCVTAEQ LAWPSPFSLA
PVLALRGEPV CVLASGDPMF YGVGASLARQ VPAAEMRVLS MPSSCALAAA RLGWPLQDLQ
VVSLVARPLA ALNAHLHSGM RLLVLSNDGD SPAAIAAQLR GQGFGPSRLQ VFEHLGGVDE
RALAGTAQDW PHTGIAALNL VAVECLATPD APRLHRLAGL PDAAYRHDGQ LTKRDVRAIT
LARLAPQPGE LLWDVGAGCG SIGIEWMRAH PACRALAIEA DEGRQGLIEH NRDALGVPGL
QLVRGKAPAA LQGLEQPDAI FIGGGVTRAG VLDLCWASLR PGGRLVANAV TLQSELALAH
FREQHGGELT RIHVAHAQPL GAFDTWRQAL PITLLEVLKP ADA
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