Gene Pput_4670 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4670 
Symbol 
ID5194173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp5237498 
End bp5238103 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content63% 
IMG OID640589153 
Productrare lipoprotein B 
Protein accessionYP_001269974 
Protein GI148549872 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2980] Rare lipoprotein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAC GCAATTTGCT GGTAATCGGC CTGGCGGTCA TGCTCAGCGC CTGCGGTTTC 
CAGCTGCGCG GCACCGGCTC CACCGAGCTG AGCGTAAAGG AAATGGACGT CAGCGCGCGC
AATGCCTATG GCCCGACCGT GGTCCAGCTG CGTGAAGTGC TGGAACGTAG CGGCGTCAAC
GTGCACACCG GCGCACCGTA TCGCCTGGTG CTGACCAACG AACAGGAGCG CGAGCGCTCG
GCTACCTACA ACAGCGGCAA CCGTACCGCC GAGTACGAGC TGACCACCAA GCTGGATTAC
AGCATCCTGG GCCTGAACAA CCTGGAGCTG ATGAGCGACA AGCTGGAGGT GCGCAAGGTC
TACGTGCGTG ACGGCTCGAA CATCACCGGC TCCGAGCAGG AAGCCAAACG CGCCCGCGAA
GAAATGCGCC GCGACCTGGT CAACGCCATG GTCGTACGTT TGCAAATGCT GTCCCCATCC
CAGCTGGATG AGTTGCAGCG TAAAGCCGAC GAGCGCGCCA AAGCCGAAGC TGCCGCGCTG
GAGGCTGCCC GCCGCCAGCA AGCCGAGACG CCTCAGCAAT CGCCACTGGA AGTACCGGGC
AACTAA
 
Protein sequence
MIKRNLLVIG LAVMLSACGF QLRGTGSTEL SVKEMDVSAR NAYGPTVVQL REVLERSGVN 
VHTGAPYRLV LTNEQERERS ATYNSGNRTA EYELTTKLDY SILGLNNLEL MSDKLEVRKV
YVRDGSNITG SEQEAKRARE EMRRDLVNAM VVRLQMLSPS QLDELQRKAD ERAKAEAAAL
EAARRQQAET PQQSPLEVPG N