Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4670 |
Symbol | |
ID | 5194173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5237498 |
End bp | 5238103 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640589153 |
Product | rare lipoprotein B |
Protein accession | YP_001269974 |
Protein GI | 148549872 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2980] Rare lipoprotein B |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAC GCAATTTGCT GGTAATCGGC CTGGCGGTCA TGCTCAGCGC CTGCGGTTTC CAGCTGCGCG GCACCGGCTC CACCGAGCTG AGCGTAAAGG AAATGGACGT CAGCGCGCGC AATGCCTATG GCCCGACCGT GGTCCAGCTG CGTGAAGTGC TGGAACGTAG CGGCGTCAAC GTGCACACCG GCGCACCGTA TCGCCTGGTG CTGACCAACG AACAGGAGCG CGAGCGCTCG GCTACCTACA ACAGCGGCAA CCGTACCGCC GAGTACGAGC TGACCACCAA GCTGGATTAC AGCATCCTGG GCCTGAACAA CCTGGAGCTG ATGAGCGACA AGCTGGAGGT GCGCAAGGTC TACGTGCGTG ACGGCTCGAA CATCACCGGC TCCGAGCAGG AAGCCAAACG CGCCCGCGAA GAAATGCGCC GCGACCTGGT CAACGCCATG GTCGTACGTT TGCAAATGCT GTCCCCATCC CAGCTGGATG AGTTGCAGCG TAAAGCCGAC GAGCGCGCCA AAGCCGAAGC TGCCGCGCTG GAGGCTGCCC GCCGCCAGCA AGCCGAGACG CCTCAGCAAT CGCCACTGGA AGTACCGGGC AACTAA
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Protein sequence | MIKRNLLVIG LAVMLSACGF QLRGTGSTEL SVKEMDVSAR NAYGPTVVQL REVLERSGVN VHTGAPYRLV LTNEQERERS ATYNSGNRTA EYELTTKLDY SILGLNNLEL MSDKLEVRKV YVRDGSNITG SEQEAKRARE EMRRDLVNAM VVRLQMLSPS QLDELQRKAD ERAKAEAAAL EAARRQQAET PQQSPLEVPG N
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