Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4660 |
Symbol | |
ID | 5190519 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 5226754 |
End bp | 5228037 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640589143 |
Product | glutamate-1-semialdehyde aminotransferase |
Protein accession | YP_001269964 |
Protein GI | 148549862 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.333765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.395139 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCCGTT CCGAAGCCCT GTTCGCCCAA GCCCAGAAGC ACATCCCTGG CGGTGTCAAC TCGCCAGTCC GCGCTTTCAA GAGCGTTGGC GGCACGCCGC TGTTCTTCAA GCATGCCGAA GGCGCCTATG TCGTTGACGA GGACGACAAA CGCTACGTCG ACTACGTCGG CTCCTGGGGC CCGATGATTC TCGGCCACGG CCACCCGGAC GTGCTGGACT CGGTACGCAA GCAGCTGGAG CATGGCCTGT CCTACGGCGC GCCGACCGCC ATGGAAACCG AGATGGCCGA CCTGGTCTGC TCGATCGTCC CGTCGATGGA AATGGTGCGC ATGGTCAGCT CGGGCACTGA AGCCACCATG AGTGCCATCC GACTGGCACG TGGCTACACT GGCCGTGATG CCATCATCAA GTTCGAAGGC TGCTACCACG GCCACTCCGA CAGCCTGCTG GTAAAAGCCG GCTCCGGCTT GCTGACCCAA GGCGTGCCAA GTTCGGCAGG CGTGCCAGCG GACTTCGCCA AGCACACCCT GACCCTGCCG TTCAACGACA TCGCCGCCGT CGAGAAGACC CTGGCCGAAG TTGGCCAGAC CGTGGCCTGC ATCATCGTGG AGCCAGTGGC CGGCAACATG AACTGCGTAC CACCGGCACC GGGTTTCCTC GAGGGCCTGC GCGAGCAATG CGACAAGCAT GGCGTGGTGC TGATCTTCGA CGAAGTGATG ACCGGTTTCC GCGTCTCGCT CGGCGGCGCC CAGGGCCATT ACGGCATCAC GCCGGACCTG TCGACCTTCG GCAAGATCGT CGGTGGCGGC ATGCCGGTCG GCTGTTTCGG CGGCAAGCGT GAAATCATGG GCTGCATCGC CCCGCTCGGC CCGGTCTACC AGGCCGGCAC CCTGTCGGGC AATCCGCTGG CCATGGCCGC CGGCCTGACC ACCCTCAAGC TGATCAGCCG CCCAGGTTTC CACGCCGAGC TGACCGACTA CACCAGCCGC ATGCTTGACG GCCTGCAGCA ACGCGCCGAT GCCGCTGGCG TGCCATTCGT CACCACCCAG GCCGGTGCCA TGTTCGGCCT GTACTTCAGC GGCGCCGACG ATATCGTCAC CTTCGAAGAC GTGATGGCCA GCGATGCCGA GCGCTTCAAG CGCTTCTTCC ACCTGATGCT CGACGGTGGC GTGTACCTGG CACCGAGCGC ATTCGAGGCG GGCTTCACCT CCATCGCCCA TGGCGACAAG GAGCTGCAGA TCACCCTGGA TGCGGCTGAG AAAGCCTTTG CTGCCCTGAA GTGA
|
Protein sequence | MSRSEALFAQ AQKHIPGGVN SPVRAFKSVG GTPLFFKHAE GAYVVDEDDK RYVDYVGSWG PMILGHGHPD VLDSVRKQLE HGLSYGAPTA METEMADLVC SIVPSMEMVR MVSSGTEATM SAIRLARGYT GRDAIIKFEG CYHGHSDSLL VKAGSGLLTQ GVPSSAGVPA DFAKHTLTLP FNDIAAVEKT LAEVGQTVAC IIVEPVAGNM NCVPPAPGFL EGLREQCDKH GVVLIFDEVM TGFRVSLGGA QGHYGITPDL STFGKIVGGG MPVGCFGGKR EIMGCIAPLG PVYQAGTLSG NPLAMAAGLT TLKLISRPGF HAELTDYTSR MLDGLQQRAD AAGVPFVTTQ AGAMFGLYFS GADDIVTFED VMASDAERFK RFFHLMLDGG VYLAPSAFEA GFTSIAHGDK ELQITLDAAE KAFAALK
|
| |