| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4656 |
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| Symbol | |
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| ID | 5195230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5221185 |
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| End bp | 5222837 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640589139 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_001269960 |
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| Protein GI | 148549858 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.216664 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGC ACCAGTACGC TGAAACCCAC GAAGTCACCA ACCAGCCGCC GCCGCTCGAC
GGTGCCAACC TGTACCGCCT CGACCTGCCA TTGCAAGAAT GGTCAAGGCG TTTTGGCGCG
GGCTGGGCCG AGTCGCGGAT CGACGCCTAT GGTGCCCTGG CCGGCGGCCC GCTGATGCAG
GCAGGCTTCC TGGCCAACGC ACACAAACCC GAGTTCAGCA GCCACGACCG CTATGGCCAT
CGCATCGACC TGGTCGAGTT CCACCCGGCC TACCATGAGC TGATGCGTAC CGCCGTCGAA
CATGGCCTGC CTTCTTTGCC ATGGGCCGAA CCCCGTGCTG GCGCCCATGT TGCACGGGCT
TCGATGACCT ACCTGCACAG CCAGGCCGAG GCCGGCACCG GCTGCCCGCT GACCATGACG
TTTGCCGCCG TGCCGGCATT GCGCCTGCAG CCTGAGCTGG CTGAATACTG GCTGCCGAAA
ATCCTTGCCT GCGAATATGA CCCGCGCAAC ATTGGCGACC GGCACAAGGC CGGGGTCACC
CTGGGCATGG CCATGACCGA AAAGCAGGGC GGCACCGATG TGCGCGCCAA CACTACCCGG
GCCTATCCGG TCGGTGCGCC AGGCCCGGGG CAGGCTTATG AGCTGGTTGG CCACAAGTGG
TTCTGCTCGG CGCCGATGTG CGACGCTTTC CTGACCTTGG CGCAAACCGA AAAAGGCCTG
AGCTGCTTCC TGTTGCCGCG CCACCGCCCC GATGACAACC GCAACCAGTT CTATATCCAG
CGCCTGAAGA ACAAGCTGGG CAACAGCTCC AACGCCTCCA GCGAGGTGGA GTTCCGCGGT
GCGCTGGCGT GGATGATTGG CGAAGAGGGA CGCGGCGTGC CGACCATCAT CGAGATGGTC
GCCATGACCC GGTTCGACTG CATGGTCGGC TCCAGCGCAC TGATGCGCCA GGCGTTGACG
CAGGCGGCCC ACCATTGCGC GCATCGCAAG GTCGGCGGGC GGGTGCTTAA TGAGCAACCT
CTGATGCAGA ACGTGCTGGC CGACCTGGCC CTGGAAAGCG AGGCTGCGCT TGCCCTGAGC
TTGCGCATGG GCCAGGCGCT GGAGCAACTG GACGACCCGC AGCAGGCGCA TTTCGCCCGG
CTGGTCACGG CGGTGGGCAA GTACTGGATC TGCAAACGTG CGCCGGCCAT GATCAACGAG
GCCGCCGAAT GCCTGGGTGG CGCGGGTTAT GTGGAAGACA GCATTCTGCC ACGGCTGTAC
CGCGAGGCAC CGGTCAACTC GACCTGGGAG GGCTCGGGCA ACGTGCAGTG CCTGGATGTG
CTGCGGGCCT TGTCCAAGGA GCCAGGCGTA CTCGATGCAC TGTTTGTCGA GCTGGGTGAC
GGGCATGGCG ACCCGCGCCT GGCAGCGCAT ATCGGCAACC TCAAGGGGGC GTTTGCCGAC
ACCGGTGACA TGCAGTACCG CGCGCGGCAA CTGACCGAGG ATATTGCTCT GGCGTTGCAG
GCCAAGCTGC TGCTGGAGGC GGGGAATACG GAGGTCAGTG ATGCGTTTAT CGGCAGCCGC
TTGGCCGGTG GTGGCCGGGT GTACGGGGCG CTGCCGCGAG GTGTGGATGT GATGGCATTG
GTAACCAGGG CTACGCCTGT CTGGCCGCTG TAG
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| Protein sequence | MSLHQYAETH EVTNQPPPLD GANLYRLDLP LQEWSRRFGA GWAESRIDAY GALAGGPLMQ
AGFLANAHKP EFSSHDRYGH RIDLVEFHPA YHELMRTAVE HGLPSLPWAE PRAGAHVARA
SMTYLHSQAE AGTGCPLTMT FAAVPALRLQ PELAEYWLPK ILACEYDPRN IGDRHKAGVT
LGMAMTEKQG GTDVRANTTR AYPVGAPGPG QAYELVGHKW FCSAPMCDAF LTLAQTEKGL
SCFLLPRHRP DDNRNQFYIQ RLKNKLGNSS NASSEVEFRG ALAWMIGEEG RGVPTIIEMV
AMTRFDCMVG SSALMRQALT QAAHHCAHRK VGGRVLNEQP LMQNVLADLA LESEAALALS
LRMGQALEQL DDPQQAHFAR LVTAVGKYWI CKRAPAMINE AAECLGGAGY VEDSILPRLY
REAPVNSTWE GSGNVQCLDV LRALSKEPGV LDALFVELGD GHGDPRLAAH IGNLKGAFAD
TGDMQYRARQ LTEDIALALQ AKLLLEAGNT EVSDAFIGSR LAGGGRVYGA LPRGVDVMAL
VTRATPVWPL
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