Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_4574 |
Symbol | rpsO |
ID | 5193968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 5118343 |
End bp | 5118612 |
Gene Length | 270 bp |
Protein Length | 89 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640589054 |
Product | 30S ribosomal protein S15 |
Protein accession | YP_001269878 |
Protein GI | 148549776 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0184] Ribosomal protein S15P/S13E |
TIGRFAM ID | [TIGR00952] ribosomal protein S15, bacterial/organelle |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.0323645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCCTCA GCGTTGAAGA AAAAGCTCAG ATCGTTGCCG AATACCAGCA AGCCGCCGGC GATACCGGTA GCCCGGAAGT GCAGGTTGCT CTGCTGACCG CCAACATCAA CAAGCTGCAA GGCCACTTCA AGGCCAACGA TAAAGACCAC CACTCCCGTC GTGGTCTGAT CCGTATGGTC AACCAGCGTC GTAAGCTGCT GGATTACCTG AAGGGCAAAG ACACCACTCG TTACAGCGCC CTGATCGGTC GCCTGGGCCT GCGTCGCTAA
|
Protein sequence | MALSVEEKAQ IVAEYQQAAG DTGSPEVQVA LLTANINKLQ GHFKANDKDH HSRRGLIRMV NQRRKLLDYL KGKDTTRYSA LIGRLGLRR
|
| |