| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4542 |
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| Symbol | |
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| ID | 5194718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 5079842 |
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| End bp | 5080858 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640589022 |
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| Product | ketol-acid reductoisomerase |
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| Protein accession | YP_001269846 |
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| Protein GI | 148549744 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0059] Ketol-acid reductoisomerase |
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| TIGRFAM ID | [TIGR00465] ketol-acid reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0178067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000281434 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAGTTT TCTACGATAA AGACTGCGAC CTTTCCATCA TCCAGGGTAA GAAAGTCGCC
ATCATCGGTT ACGGCTCCCA GGGCCACGCT CAGGCGTGCA ACCTGAAAGA CTCCGGTGTA
GACGTTACCG TCGGTCTGCG TAAAGGTTCG GCTACCGTTG CCAAGGCTGA AGCCCACGGC
CTGAAAGTTG CCGATGTTGC TACCGCTGTC GCTGCGGCTG ACCTGGTCAT GATCCTGACC
CCGGACGAGT TCCAGGGTGC TCTGTACAAG AACGAAATCG AGCCGAACAT CAAGAAGGGC
GCTACCCTGG CCTTCTCTCA CGGTTTCTCG ATCCACTACA ACCAGGTTGT TCCGCGTGCC
GACCTCGACG TGATCATGAT CGCGCCGAAA GCCCCGGGCC ACACCGTTCG CTCCGAGTTC
GTCAAAGGCG GCGGCATCCC TGACCTGATC GCTATCTACC AGGACGCTTC CGGCAACGCC
AAGAACGTCG CACTGTCCTA CGCTTCGGGC GTGGGTGGTG GCCGTACCGG TATCATCGAA
ACCACCTTCA AGGACGAAAC TGAAACCGAC CTGTTCGGTG AGCAGGCTGT TCTGTGTGGC
GGTACCGTCG AGCTGGTCAA AGCCGGTTTC GAAACCCTGG TCGAAGCTGG CTACGCGCCG
GAAATGGCCT ACTTCGAGTG CCTGCACGAA CTGAAACTGA TCGTAGACCT CATGTACGAA
GGCGGCATCG CCAACATGAA CTACTCGATC TCCAACAACG CCGAGTACGG TGAGTACGTC
ACTGGCCCGG AAGTCATCAA CGAAGAATCC CGCAAGGCCA TGCGCAATGC CCTGAAGCGC
ATCCAGGACG GCGAGTACGC GAAGATGTTC ATCTCCGAAG GTGCTACCAA CTACCCATCG
ATGACCGCCA AGCGCCGCAA CAACGCCGCT CACGGCATCG AAATCATCGG CGAGCAGCTG
CGCTCGATGA TGCCGTGGAT CTCGGCTAAC AAAATCGTCG ACAAGACCAA GAACTAA
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| Protein sequence | MKVFYDKDCD LSIIQGKKVA IIGYGSQGHA QACNLKDSGV DVTVGLRKGS ATVAKAEAHG
LKVADVATAV AAADLVMILT PDEFQGALYK NEIEPNIKKG ATLAFSHGFS IHYNQVVPRA
DLDVIMIAPK APGHTVRSEF VKGGGIPDLI AIYQDASGNA KNVALSYASG VGGGRTGIIE
TTFKDETETD LFGEQAVLCG GTVELVKAGF ETLVEAGYAP EMAYFECLHE LKLIVDLMYE
GGIANMNYSI SNNAEYGEYV TGPEVINEES RKAMRNALKR IQDGEYAKMF ISEGATNYPS
MTAKRRNNAA HGIEIIGEQL RSMMPWISAN KIVDKTKN
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