| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4479 |
|---|
| Symbol | |
|---|
| ID | 5190498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 5003253 |
|---|
| End bp | 5003885 |
|---|
| Gene Length | 633 bp |
|---|
| Protein Length | 210 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640588954 |
|---|
| Product | maleylacetoacetate isomerase |
|---|
| Protein accession | YP_001269783 |
|---|
| Protein GI | 148549681 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0625] Glutathione S-transferase |
|---|
| TIGRFAM ID | [TIGR01262] maleylacetoacetate isomerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.28654 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCTGT ACACCTATTA CCGTTCCACC TCGTCTTACC GGGTGCGCAT TGCCCTGGCA
CTGAAGGGGC TGACTTACCA GTCCCTGCCG GTCAACCTGC TGCAGGGTGA GCAGCGCGGC
GAGGGCTATG TAGCCGTCAA CCCGCAGGGC CGTGTACCGG CCTTGCGCAC CGACGGTGGT
GAGGTACTGG TGCAGTCGCC GGCGATCATC GAGTACCTGG AAGAGGTTTA TCCACAGCCT
GCGTTGCTGC CGGCCACCGC CGAGGCACGG GCCAAGGTAC GTGGGGTGGC GGCCATCATT
GGTTGCGACA TTCATCCGCT GCATAACGTC AGTGTGCTCA ACCGGCTGCG CCAGGCCGGT
CAGGATGAGG GGCAGGTCAA CCAGTGGATC GGCCACTGGA TCAGCCAAGG GCTCGCGGCA
GTGGAGCAAC TGATTGGCGA TCACGGTTTC TGCTTTGGCG ACACGCCTGG GCTGGCGGAT
GTGTACCTGA TCCCGCAGTT GTACGCGGCC GAACGCTTCA ACATCGACCT CGACAGCTTC
CCGCGCATCC TGCGGGTTGC CGCACTGGCG GCCGCGCACC CGGCGTTCGC CAAGGCCCAC
CCCGCCCAGC AGCCGGACAG CCCGGCTCAG TGA
|
|---|
| Protein sequence | MELYTYYRST SSYRVRIALA LKGLTYQSLP VNLLQGEQRG EGYVAVNPQG RVPALRTDGG
EVLVQSPAII EYLEEVYPQP ALLPATAEAR AKVRGVAAII GCDIHPLHNV SVLNRLRQAG
QDEGQVNQWI GHWISQGLAA VEQLIGDHGF CFGDTPGLAD VYLIPQLYAA ERFNIDLDSF
PRILRVAALA AAHPAFAKAH PAQQPDSPAQ
|
|---|
| |