| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4329 |
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| Symbol | |
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| ID | 5195098 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4840749 |
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| End bp | 4842386 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588806 |
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| Product | hypothetical protein |
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| Protein accession | YP_001269636 |
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| Protein GI | 148549534 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.243186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACCT GCGGCGAAGT ACTGGTCAAA CTCCTTGAAG GCTATGGCGT CGATCATGTC
TTCGGCATCC CCGGTGTACA TACCGTGGAG CTCTATCGTG GCCTGGCGGG CTCTTCCATT
CGCCACATCA CCCCACGTCA TGAGCAAGGT GCCGGGTTCA TGGCTGACGG CTATGCGCGC
ACCCGCGGCA AACCCGGGGT GTGCTTCATT ATCACCGGCC CGGGCATGAC CAATATCACC
ACTGCCATGG GCCAGGCCTA TGCCGACTCG ATCCCGATGC TGGTGATTTC CAGCGTGCAG
TCCCGTGACC AGCTGGGCGG TGGCCGTGGC AAGCTGCACG AACTGCCCAA CCAAGCCGCG
CTGGTATCGG GTGTGGCGGC GTTTTCCCAC ACCTTGATGA GTGCAGCCGA CTTGCCGCAG
GTGCTGGCCC GGGCATTTGC CGTGTTCGAC AGTGCCCGGC CACGCCCGGT GCATATCGAA
ATCCCGCTCG ATGTGCTGGT TGAACCGGCC GACTTCCTGC TGCCGGGCCG CCCTGTACGG
GGCAGTCGGG CAGGGGCTGC ACCGCAGGCC GTGGCGCAGA TGGCTGAGCG ACTGGCCAGT
GCGCGTCGGC CGCTGATTCT GGCCGGTGGC GGGGCGTTGG CTGCGGGCGC TGCGCTGGCA
CGCCTGGCCG AACACCTTCA GGCCCCGGTA GCGCTGACCA TCAATGCCAA AGGCTTGCTG
CCTGCCAGCC ACCCATTGCA GATCGGCTCG ACCCAGTCGT TACCCGCCAC ACGGGCGCTG
GTGGCCGAGG CCGACGTGGT GCTGGCGATC GGTACCGAAC TGGCTGAAAC CGATTATGAC
GTGACCTTCA AGGGAGGCTT CGAGATCCCG GGCAGGCTGC TGCGCATTGA CATCGACCCG
GACCAGACCG TGCGCAATTA TCTGCCGGAG CTGGCGCTGG TAGCCGATGC CGAGCTGGCA
GCCGAAGCGC TGCTCGGTGC CCTGCAAGCC CAGCCGCAGC CAGCGCACGA AAGCACTTGG
GGCATGGCTC GCGTGGCCAA CCTGCGCAAG GTGCTGGCGG CAGACTGGGA CCAGCCAACC
CTGAGCCAGA CACGTTTGCT GAGCGCCATA CTGGAGCGCC TGCCTAATGC GATTCTGGTG
GGCGACTCGA CCCAACCTGT GTACACCGGC AACCTGACAC TCGACATGGA GCAGCCACGC
CGCTGGTTCA ACGCCTCGAC CGGTTACGGC ACCTTGGGTT ACGCGTTGCC AGCAGCCATG
GGCGCCTGGT TGGGCAGTGC CGAGCAGGCC GTCGAACGGG CTCCGGCGGT GTGCCTGATT
GGTGATGGTG GTTTGCAGTT CACCCTGCCG GAACTGGCCA GTGCAGTGGA GGCACAGGTA
CCGCTGATCG TGCTGCTGTG GAATAACCAG GGGTACGAGG AAATCAAGAA ATACATGGTC
AATCGGGCGA TCGAGCCGGT CGGGGTTGAT ATCCATACCC CGGATTTCAT CGGCGTGGCG
CGAGCGTTGG GCGCGGCAGC AGAGAACGTG GCCGATATTG CCCAATTGCA GGCGGCGCTC
GGGCAAGCGG TGGAGCGCAA GGGGCCGACC TTGATTCAGG TGGACCAGAA TCAGTGGCTG
GCCGCGGTGT TGGGTTGA
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| Protein sequence | MATCGEVLVK LLEGYGVDHV FGIPGVHTVE LYRGLAGSSI RHITPRHEQG AGFMADGYAR
TRGKPGVCFI ITGPGMTNIT TAMGQAYADS IPMLVISSVQ SRDQLGGGRG KLHELPNQAA
LVSGVAAFSH TLMSAADLPQ VLARAFAVFD SARPRPVHIE IPLDVLVEPA DFLLPGRPVR
GSRAGAAPQA VAQMAERLAS ARRPLILAGG GALAAGAALA RLAEHLQAPV ALTINAKGLL
PASHPLQIGS TQSLPATRAL VAEADVVLAI GTELAETDYD VTFKGGFEIP GRLLRIDIDP
DQTVRNYLPE LALVADAELA AEALLGALQA QPQPAHESTW GMARVANLRK VLAADWDQPT
LSQTRLLSAI LERLPNAILV GDSTQPVYTG NLTLDMEQPR RWFNASTGYG TLGYALPAAM
GAWLGSAEQA VERAPAVCLI GDGGLQFTLP ELASAVEAQV PLIVLLWNNQ GYEEIKKYMV
NRAIEPVGVD IHTPDFIGVA RALGAAAENV ADIAQLQAAL GQAVERKGPT LIQVDQNQWL
AAVLG
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