| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4225 |
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| Symbol | |
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| ID | 5191292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4726682 |
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| End bp | 4727386 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640588702 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001269533 |
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| Protein GI | 148549431 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3226] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGACC AAGGCGCCGC CGGCATCGCC ACCGCCGTCG CCGAAAGCGT GCAATACCAA
GGCCGCAAGA CTGCCCGCCA AGGCAGCGAA CAGCGTCGCC AGTTGATTCT CGATGCCGCC
ATGCGCATTG TCGTGCGCGA TGGCGTGCGC GGTGTGCGCC ACCGGGCAGT GGCCGCCGAG
GCCGGCGTGC CATTGTCGGC CACCACCTAC TACTTCAAGG ACATCGAGGA CCTGCTCACC
GATACCTTTG CCCAGTACGT CGAGCGCAGT GCGGCTTACA TGGCCAAGCT GTGGGCCAAC
ACCGAGGTGG TGTTGCGCCA GTTGCTGGCA CAGGGCGATG GCAGCCCGCA GGCCCGGGCG
CGGCTGGCTG ACGAGGTGGC GCGCATGACC GCCGACTACG TTCAGCGGCA ACTGCTGAAC
CGCCGTGACT TCCTGATGGC CGAGCAGGCT TTCCGCCAGG AAGCATTGCT GTGCCCGCGA
CTGGCTGAGC TGGTGTGCGC TCATGAGCAG ATCCTGCTGC ACGGCACCCG GCAATTGCTG
CAGGTCGTGG GCTCGCGGCA GCCGGAGCAG GATGCACAGA TGTTGACGGC GATTATCGAG
CAGTTGGAAT ATCAAGGCCT GCTCAAGCAA GCGAATGCGC AAGCCGATGG GCAGATGCTC
GCTATGCTTA CCCGATACCT GCAGCTGGTG CTGGCATCGG CCTGA
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| Protein sequence | MPDQGAAGIA TAVAESVQYQ GRKTARQGSE QRRQLILDAA MRIVVRDGVR GVRHRAVAAE
AGVPLSATTY YFKDIEDLLT DTFAQYVERS AAYMAKLWAN TEVVLRQLLA QGDGSPQARA
RLADEVARMT ADYVQRQLLN RRDFLMAEQA FRQEALLCPR LAELVCAHEQ ILLHGTRQLL
QVVGSRQPEQ DAQMLTAIIE QLEYQGLLKQ ANAQADGQML AMLTRYLQLV LASA
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