Gene Pput_4111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_4111 
Symbol 
ID5192184 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4621165 
End bp4621488 
Gene Length324 bp 
Protein Length107 aa 
Translation table11 
GC content54% 
IMG OID640588588 
Producthypothetical protein 
Protein accessionYP_001269419 
Protein GI148549317 
COG category 
COG ID 
TIGRFAM ID[TIGR01560] uncharacterized phage protein (possible DNA packaging) 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTCA TCACCTTGGA GCAAGCAAAA TCCCAACTGC GGGTGGATGA CGACGCCGAC 
GACGATGACA TTCGAGACAA GGTTCTGGAG GCCAGCGACC TTGTCCGAGG TTATCTAAAG
TCAGCTGCCG ACGGCTATCT AGATGCTGAT GGCGAGGCGA TTCCTGGCAA AGTTCCCTAC
GCGGTTAAAG CAGCCACCAA GCTCATGCTT GGGTATCTGT ACAAACAGCG CGATAACGAC
CAAGACCGGG AATTCGAACT TGGCATGTTG CCAAAACCGG TCACCGCGCT CCTATACCAC
CTTCGCGATC CGGCACTGGC ATGA
 
Protein sequence
MMFITLEQAK SQLRVDDDAD DDDIRDKVLE ASDLVRGYLK SAADGYLDAD GEAIPGKVPY 
AVKAATKLML GYLYKQRDND QDREFELGML PKPVTALLYH LRDPALA