| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_4051 |
|---|
| Symbol | |
|---|
| ID | 5194560 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4566403 |
|---|
| End bp | 4567467 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640588528 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001269359 |
|---|
| Protein GI | 148549257 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCGCT GGATCTGGCT GGGCGCTGCA CTGCTGATCG CTGTGCTGCT TTATAGCCTG
CACAATATTC TTACGCCGTT CCTGGTCGGC ATCATGCTGG CCTACCTGGC CGACCCGCTG
GTCGATCGTC TCGAGCGCCT GGGGCTTTCG CGTACCTGGG GTGTGGTAGT GGTGTTCGGC
CTGTTCACGC TGTTGCTGTT GGCGTTGTTG CTGGTGCTTG TGCCGATGCT GGCCAAGCAG
TTGGTGCGCC TGTACGAATT GGCCCCGCAG ATGCTCGACT GGCTTGAGCA TGTCGCGCTG
CCGTGGGTAC AGGGCCGCCT TGGCCTGGCC GATGGTTTCT GGAAATTCGA CAAGATCAAG
GCCGCCATCG GCGCGCACAT GGGGCAGACC ACCGATATCG TCGGCATGCT GCTGTCCCAG
GCCACCGCCT CCAGCCTGGC GTTGGTGGGC TGGTTGGCCA ACATGGTGCT GATTCCGGTA
GTGGGCTTCT ATCTGCTGCG CGATTGGGAC TTGATGATGG GCAAGCTGCG CGGCCTGCTG
CCGCGCCAGC GCGAGCCACA AGTGATGGGC CTGGCAGGTG AATGCCATGA AGTGCTGGGG
GCATTCGTGC GCGGGCAACT GATGGTGATG CTGGCCCTGG GCGTCATCTA TTCAGCCGGC
CTGATGCTGG TGGGGCTCGA ACTCGGTCTG CTGATCGGCA TGCTTGCAGG CCTTGCGGCC
ATCGTGCCTT ACATGGGCTT CATCATTGGC ATTGGTGCCG CGCTGGTGGC CGGCCTGTTC
CAGTTCGGTG GCGACCTGTA TCCGATGCTG GGCATCGTTG CGGTGTTCAT GGTCGGGCAG
GCGCTGGAGG GTATGGTGCT GACCCCTCTG CTGGTGGGCG ATCGCATCGG CCTGCACCCG
GTTGCGGTGA TCTTTGCCAT CCTCGCCGGG GGTGAACTGT TCGGCTTCAC CGGTGTGCTG
CTGGCGCTGC CGGTGGCGGC GGTGATCATG GTGCTGCTGC GGCATGTGCA TGCCCTGTAC
AAGGAGTCGG ATATGTACGC CGGGAACATC GACCCGGAGC TTTGA
|
|---|
| Protein sequence | MRRWIWLGAA LLIAVLLYSL HNILTPFLVG IMLAYLADPL VDRLERLGLS RTWGVVVVFG
LFTLLLLALL LVLVPMLAKQ LVRLYELAPQ MLDWLEHVAL PWVQGRLGLA DGFWKFDKIK
AAIGAHMGQT TDIVGMLLSQ ATASSLALVG WLANMVLIPV VGFYLLRDWD LMMGKLRGLL
PRQREPQVMG LAGECHEVLG AFVRGQLMVM LALGVIYSAG LMLVGLELGL LIGMLAGLAA
IVPYMGFIIG IGAALVAGLF QFGGDLYPML GIVAVFMVGQ ALEGMVLTPL LVGDRIGLHP
VAVIFAILAG GELFGFTGVL LALPVAAVIM VLLRHVHALY KESDMYAGNI DPEL
|
|---|
| |