Gene Pput_3940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3940 
Symbol 
ID5190331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4440940 
End bp4441203 
Gene Length264 bp 
Protein Length87 aa 
Translation table11 
GC content62% 
IMG OID640588413 
Producthypothetical protein 
Protein accessionYP_001269248 
Protein GI148549146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.220746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAACC TCAAGCGCGC CCTGGCGGCA GTGTTCGTGC TGCTGTTGGC GGCTGTGGTG 
CTGTTCTTCG TGCTGGAGAA CCAGCAAGCC GTGTCATTGG TCCTGTTCGG TTGGGCTACG
CCAGCCATGC CGGTTGCTGT TCTGGTATTG GCTGCCTTGG TCATTGGCCT GGCGGTCGGG
CCGTTGCTGG GGGCTTACGG CGTGCAGCGC AGCAAGCGCA AGATCAGGGC TTCTGCCCGT
CAGGCGGCAC TGAACGGCAA CTAA
 
Protein sequence
MRNLKRALAA VFVLLLAAVV LFFVLENQQA VSLVLFGWAT PAMPVAVLVL AALVIGLAVG 
PLLGAYGVQR SKRKIRASAR QAALNGN