| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3905 |
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| Symbol | |
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| ID | 5195418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4385739 |
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| End bp | 4386803 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640588378 |
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| Product | polysaccharide export protein |
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| Protein accession | YP_001269213 |
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| Protein GI | 148549111 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.132595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAATT TGAAAGTGGC AGTTTTGGCG CTGGCGTCGC TAAGCCTTAC TGGCTGTGGT
GGCACGTTGT CCGGCGCCGG CCCATATAAG GGCACGATTG AGAGCAAGAA CGAGGCATAC
AATCTTGTAG ATATTGATGC CAGCACCATC GGCCCATATT TGGCGGGAGC TCCACGCCCT
GCATTGGCCT CTGTCACCAA ACCACAGTCG CCGGAGGTGC GCCTAGCAGC AGGAGATACT
CTGGCTGTTT TGATCGCTGA CACAGCACCG GCAGAGTCCG CCCTGTTTGC CCCGCTGGCC
ACTGGCGGCA CTCAACTGAA GTCACGAATA GATGCACAAG GAATGCTCTC TCTGCCTTAT
GTAGGTCGCC AATTTGTAGC TGGCATGACG CTTAACCAAG TTGAAAGCAT GATTCGCCAA
AAACTTAAGG GTATTACCAC CGACGTACAA ACTCACGTTG AACTGGTAGG CGATCTTTCC
GGCTCTGTAC TCGTCGCTGG CGCAGTAAAG ACCCCCGGCC GCTTCAGCAC CTTGCAAGGA
CCACTGACGC TGCTGGATGC AGTGAACCAA GCTGGTGGTC CAGTACTTGA ACCACACTTG
GTCAATGTAA CCGTACGAAC CGGAAACCAA GTGCAACAAT TCAACTACGA GGATGTGCTT
GCCGGCAATA ATATGGTACT ACGCCCAAAC TCCGAGGTAG TCCTTGACCG AGCGCGTCAA
CGATTTGTAG CAATGGGTGC TGTAGCAGAG CCAGGACTTA AGGATCTACC GAGCCAAAAC
ACAAATCTTC TGGACGCACT GGGTAGCGTC GGCGGCTTGC GAGAGACCAA TGCTAATCCT
GAAGGTGTGT TTGTGTTCCG CATGGGCAAT GCCGGCAACT CGAAACCTAC CGTACTACGC
CTGAATATGC GCGATCCTGC AGCCATCTTC TACGCGCGAC AAATCGCCAT CAGACCTGAC
GACACTATCT ACGTAACGAA CGCAGCTGTT TATGAATGGC AAAAGGTTAT CAACCCAATT
GTCCAGACAA TGCTACTCGG CCGCGTAGTT GGCGCAACCA ACTAA
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| Protein sequence | MFNLKVAVLA LASLSLTGCG GTLSGAGPYK GTIESKNEAY NLVDIDASTI GPYLAGAPRP
ALASVTKPQS PEVRLAAGDT LAVLIADTAP AESALFAPLA TGGTQLKSRI DAQGMLSLPY
VGRQFVAGMT LNQVESMIRQ KLKGITTDVQ THVELVGDLS GSVLVAGAVK TPGRFSTLQG
PLTLLDAVNQ AGGPVLEPHL VNVTVRTGNQ VQQFNYEDVL AGNNMVLRPN SEVVLDRARQ
RFVAMGAVAE PGLKDLPSQN TNLLDALGSV GGLRETNANP EGVFVFRMGN AGNSKPTVLR
LNMRDPAAIF YARQIAIRPD DTIYVTNAAV YEWQKVINPI VQTMLLGRVV GATN
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