Gene Pput_3865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3865 
Symbol 
ID5191378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp4347980 
End bp4348669 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content63% 
IMG OID640588338 
Productenoyl-CoA hydratase 
Protein accessionYP_001269173 
Protein GI148549071 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.522354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0342792 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGC TGATTACCTA CCACGCCGAA GACGGCATCG CCACCCTTAC CCTGAACAAC 
GGCAAGGTCA ATGCCATCTC GCCGGACGTC ATCACTGCCT TCAATGCAGC GCTGGACCGC
GCTACCGAGG AGCGTGCAGT AGTGATCATC ACCGGGCAAC CGGGCATTCT GTCAGGCGGT
TACGACCTCA AGGTGATGAC CCGCGGCCCC AAGGACGCCA TCAGCCTGGT CACCGCCGGT
TCCACCCTCG CCCGCCGGCT GCTGTCGCAC CCGTTCCCGG TGGTGGTCGC CTGCCCCGGC
AATGCGGTGG CCAAGGGCGC CTTCCTGCTG CTGTCGGCCG ACTACCGCAT TGGCGTCGAT
GGACCATACA AGGTATGCCT GAACGAAGTG CAAATCGGCA TGACCATGCA CCACGCCGGC
ATTGAACTGG CCCGCGACCG CCTGCGCCGC TCGGCCTTCC ACCGCTCGGT GATCAATGCC
GAAGTGTTTG ACCCGCAGGG TGCCGTGGAT GCCGGCTTCC TCGACAAGGT GGTACCGGCC
GAGCAATTGC AGGAAGCGGC AATGACTGCA GCACGAGAGC TGAAGAAGCT GAACATGCTG
GCGCACAAGA ACACCAAGCT GAAAGTGCGC AAAGGGCTGC TGGAGGCGCT GGACAAGGCG
ATCGAGCTGG ATCAGCAGCA TATGGGCTAA
 
Protein sequence
MSELITYHAE DGIATLTLNN GKVNAISPDV ITAFNAALDR ATEERAVVII TGQPGILSGG 
YDLKVMTRGP KDAISLVTAG STLARRLLSH PFPVVVACPG NAVAKGAFLL LSADYRIGVD
GPYKVCLNEV QIGMTMHHAG IELARDRLRR SAFHRSVINA EVFDPQGAVD AGFLDKVVPA
EQLQEAAMTA ARELKKLNML AHKNTKLKVR KGLLEALDKA IELDQQHMG