| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3859 |
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| Symbol | |
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| ID | 5194111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4340146 |
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| End bp | 4341084 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640588331 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001269167 |
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| Protein GI | 148549065 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0499644 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATGG AATCATTCAG CGCGTTGGAG TGCTTCATCC GCAGTGCCGA GGTCGGCAGT
TTTGCCGAAG CCGCCAGGCG CCTGAGCCTT ACCCCGGCTG CCGTGGGCAA GCACGTTGCG
CAGCTGGAAG CGCGCCTGGG TGTGCGGTTG TTCCAGCGTA GTACCCGCAA GCTGACCTTG
ACCGAAGCGG GGCAGCGTTT TCTTGGCGAG GTCAGTGACA GCTTTCGCAC CATTCAGTAC
GCCGTGGCCA ACCTGGCCAG TGCAGAAGGC CAGCCGGCCG GGTCGTTACG GGTGAGTATG
GGCACGGTGT TCGGGCGTTT GTACGTGCTG CCGTTGCTGG GGGAATTCTT GCGCCGTTAC
CCGGCGATTA CCCCGGATTG GCATTTCGAC AACCGCCAGG TCGACCTGAT CGGCCAGGGT
TTCGATGCAG CGATTGGCGG TGGTTTCGAA CTGCCGCCAG GGGTGGTGGC GCGCAAGCTG
ACCCCCGCGC ACCGGGTGTT GGTGGCGGCG CCGGCTTATC TGCAGCGGCA CGCGCCGATA
GAAGACCCGC AGGCGCTGCA ACGCCATGAC GGCATCCTGG TGCGGTCACC GCAGACCGGG
CGGGTGCGCT CGTGGCCGTT GACCAGCCGT TGGCAGGCGC AGCAGCCGCT GCAATTGCGT
CAGGCGATGA CCATGAGCGA TTCGGACGCG GCGTGCGCGG TTGCCGAGCA GGCGCTGGGC
ATTGCCCTGG TGAGCCTGCC GTTTGCCGTG CCCTATTTGC TGGCCGGGCG CCTGCTGCGG
GTGTTGCCGG ACTGGTATGT GGATGATGGG CATATCAGCC TGTATTTCGC CGAGCACAAG
CTGTTGCCGG GTAAGACCCG GGCGTTCATC GATTTTGTGG TGGAGCAGTT TGCCGAGCAG
GGGCTGGCGG TGCGGTTCGA TGCCTTGCAG GCCCTTTAG
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| Protein sequence | MAMESFSALE CFIRSAEVGS FAEAARRLSL TPAAVGKHVA QLEARLGVRL FQRSTRKLTL
TEAGQRFLGE VSDSFRTIQY AVANLASAEG QPAGSLRVSM GTVFGRLYVL PLLGEFLRRY
PAITPDWHFD NRQVDLIGQG FDAAIGGGFE LPPGVVARKL TPAHRVLVAA PAYLQRHAPI
EDPQALQRHD GILVRSPQTG RVRSWPLTSR WQAQQPLQLR QAMTMSDSDA ACAVAEQALG
IALVSLPFAV PYLLAGRLLR VLPDWYVDDG HISLYFAEHK LLPGKTRAFI DFVVEQFAEQ
GLAVRFDALQ AL
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