| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3795 |
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| Symbol | tmk |
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| ID | 5195315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4258064 |
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| End bp | 4258696 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640588262 |
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| Product | thymidylate kinase |
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| Protein accession | YP_001269103 |
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| Protein GI | 148549001 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0125] Thymidylate kinase |
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| TIGRFAM ID | [TIGR00041] thymidylate kinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.398765 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.441646 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAGCGGCT TGTTTATTAC TTTGGAAGGC CCCGAAGGCG CGGGCAAGAG CACCAATCGC
GACTACCTGG CCGCGCGCCT GCGCGAACAC GGCCTGGACG TGGTGCTGAC CCGTGAGCCA
GGCGGTACGC CGCTGGCGGA AAAGGTGCGT GAACTGTTGC TGACGCCCAG CGACGAAGGC
ATGGCGGCCG ACACCGAGCT GCTGCTGGTG TTCGCCGCTC GCGCCCAGCA CCTGGCGCAG
GTCATCCGCC CGGCGCTGGC ACGCGGGGCT GTGGTGCTGT GTGACCGTTT CACGGACGCT
ACCTATGCCT ATCAGGGCGG CGGTCGTGGT TTGTCGGTAG AGCGTATCGC GGTTCTGGAG
CAATTCGTCC AGGGCGACCT GCGCCCGGAC CTGACCCTGG TCTTCGACCT GCCGGTAGAA
GTGGGCCTTG CCCGCGCCGC CGCCCGTGGC CGCCTGGACC GATTCGAGCA GGAAGGGCAG
GCGTTCTTCG AAGCAGTGCG CCAGGCGTAC CTGCAGCGCG CCCAAGGCGC GCCACAGCGC
TACAGCCTGC TTGATGCGGC ACAATCCCTG GAGGCTGTTC AGCGTGACAT CGACGCTCTG
CTGCCAGGCA TTCTGGAGCG TTGCCGTGGC TGA
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| Protein sequence | MSGLFITLEG PEGAGKSTNR DYLAARLREH GLDVVLTREP GGTPLAEKVR ELLLTPSDEG
MAADTELLLV FAARAQHLAQ VIRPALARGA VVLCDRFTDA TYAYQGGGRG LSVERIAVLE
QFVQGDLRPD LTLVFDLPVE VGLARAAARG RLDRFEQEGQ AFFEAVRQAY LQRAQGAPQR
YSLLDAAQSL EAVQRDIDAL LPGILERCRG
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