Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3769 |
Symbol | |
ID | 5192000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 4226019 |
End bp | 4227023 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640588229 |
Product | aspartate-semialdehyde dehydrogenase |
Protein accession | YP_001269077 |
Protein GI | 148548975 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.614243 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACACC CTTTGGATAT CGCCGTCGTC GGCGCCACCG GCAGCGTCGG TGAAGCCTTG GTGCAGATCC TCGAGGAACT GGCATTCCCG GTTGCCACCC TGCACCTACT GGCCAGCATG GAATCGGCGG GCAGCAGCGT AATGTTCGCT GGCAAGAAGC TGAAGGTGCG CGAAGTCGAC AGCTTCGACT TCGCCCAGGT CAAGCTGGCC TTCTTCGCCA CCGGCGCCGC CGTCAGCCGC AGCTTTGCCG GCAAGGCGCT GCAGGCGGGC TGCACGGTCA TCGACCTGTC CGGCGGCCTG GACGACGCCT TGGCCCTGGT GCCGGAAGCC AACGCCGAAC GCCTGGCCAG CCTGTCGTTG CCAGCGCGCA TTGTCAGCCC ATGCTCGGCC GCAGTAGCCC TGGCCGTCGC GCTGGCGCCG CTCAAAGGCC TGCTGGACAT CGAGCGGGTA CAAGTGATGG CCGCGTTGGC GGTGTCTGCG CAAGGCCGTG AAGCGGTCAG CGAGCTGGCC CGGCAAACCG CCGAACTGCT CAATGCCCGC CCGCTGGAGC CGCGCTTCTT CGACCGCCAG GTGGCATTCA ACCTGCTGGC CCAGGTCGGT GCTGCCGACG AGCAGGGCCA TACCGCGCTG GAGCGCCGCC TGGTCAGCGA ACTGCGCGTG CTGCTGGGCC TGCCTGAACT GAAGATTTCC GTGAGTTGTG TTCAAGTCCC GGTGTTTTTC GGCGATAGCT TCAGTGTGGC CGTGCAAAGC CGTCGCCCGG TAGACCTGGC AGCGGTCAAC CAGGCCCTGG AGGCAGCCGA CAGCATCGAA CGGGTGGAAA ACGATGATTA TCCGACCCCG GTAGGTGACG CAGTGGGCCA AGACGTGGTC TATGTTGGAC GTGTACGTCA CGGTGTCGAT GAAGACCAGC AACTCAACCT CTGGCTAACC ACTGACAACG TGCGCAAAGG CGCCGCGCTC AATGCCGTGC AAGTGGCGCA ATTGTTGATT AAACACATGC CGTAA
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Protein sequence | MTHPLDIAVV GATGSVGEAL VQILEELAFP VATLHLLASM ESAGSSVMFA GKKLKVREVD SFDFAQVKLA FFATGAAVSR SFAGKALQAG CTVIDLSGGL DDALALVPEA NAERLASLSL PARIVSPCSA AVALAVALAP LKGLLDIERV QVMAALAVSA QGREAVSELA RQTAELLNAR PLEPRFFDRQ VAFNLLAQVG AADEQGHTAL ERRLVSELRV LLGLPELKIS VSCVQVPVFF GDSFSVAVQS RRPVDLAAVN QALEAADSIE RVENDDYPTP VGDAVGQDVV YVGRVRHGVD EDQQLNLWLT TDNVRKGAAL NAVQVAQLLI KHMP
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