| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3733 |
|---|
| Symbol | |
|---|
| ID | 5191870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 4182835 |
|---|
| End bp | 4183728 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640588189 |
|---|
| Product | 1-aminocyclopropane-1-carboxylate deaminase-like protein |
|---|
| Protein accession | YP_001269041 |
|---|
| Protein GI | 148548939 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATGTAT TCGACCTCCC CCCAGCCCCT CTGCAGTTTC TGGACTTGCC CTGGCTGCGG
CAAGCCCAGG TCCAGGCCGC CATTCTGCGC CTGGACCTGA TTGACCCGCT GATCAGCGGC
AACAAGTGGT TCAAGCTACG CCACCACCTG CAACAGGCCG GCGCCAGCCA TGCTCCAGGC
CTGATCAGCC TTGGCGGCAA CCATTCCAAC CACCTGCACG CCTTGGCCGC TGCCGGCAAG
CGTTTCGGCT TCGCCACCGT CGGCCTGTTA CGCGGCCATG CCCAGGACAC GCCAACCGTG
CGTGACCTGC AGGCGCTGGG CATGGAACTG CATTGGCTAG GCTACGGCGG CTACCGTGCG
CGTAACGAGC CAGGCTTTTG GGCTTCCTGG CAGGCGCGCT ATCCAGGCTG GCACTGCATC
CCCGAAGGGG GCGGCGGGCT GGCCGGTGCG CAGGGCTGCG CGCTGATCAT GCAGCAGGCG
CGCGCGCAAA TCTCGGCCTT GGGGTGGTCA GACTACGACG CCTGGTGGTT GGCTGCCGGA
ACGGGGACTA CCTTGGCCGG GCTGGTAATG GCGGAGGCAG GGGCGCATGC CGTGCATGGC
GCCTTGGCCG TACCCAGGGA TCATGGGGTG CCGGAGACGG TGGCAGCACT GGCCGGCACG
CACGGCTACC AGCTACACGA CGCCTGCCGT GGCGGTTTCG GAAAATTCGA CGATGCGCTA
CTGACGTTCA TCGCCGACTG CGAGCAGCAC ACTGACGTGC CGCTCGAAGC CCTCTATACC
GGCAAGGCTC TGCTGGCCTT GCGTGATCAG GTCGCTGCCG GGCTGTTCAA GCCCGGCAGC
CGCCTGATCT TCGTGCACAC AGGCGGCCTG CAGGGGCGAC GCGGTTACTT GTAA
|
|---|
| Protein sequence | MHVFDLPPAP LQFLDLPWLR QAQVQAAILR LDLIDPLISG NKWFKLRHHL QQAGASHAPG
LISLGGNHSN HLHALAAAGK RFGFATVGLL RGHAQDTPTV RDLQALGMEL HWLGYGGYRA
RNEPGFWASW QARYPGWHCI PEGGGGLAGA QGCALIMQQA RAQISALGWS DYDAWWLAAG
TGTTLAGLVM AEAGAHAVHG ALAVPRDHGV PETVAALAGT HGYQLHDACR GGFGKFDDAL
LTFIADCEQH TDVPLEALYT GKALLALRDQ VAAGLFKPGS RLIFVHTGGL QGRRGYL
|
|---|
| |