| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3639 |
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| Symbol | |
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| ID | 5193594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 4062917 |
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| End bp | 4066549 |
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| Gene Length | 3633 bp |
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| Protein Length | 1210 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588095 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001268947 |
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| Protein GI | 148548845 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.847136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCGAG CTATCAATCG CCTGCTGCTC GTCCTGCTGC TGCTCAGCGG CGCGACACAG
GCTGGCCATC GCGAAGCCGC GTCCTTTACA TTACTGGCGC GCTCATCGGC CCGCCCCGTC
CAGCCCGTGC TCACGCCCGA ACAACGGCAA TGGCTCGAAG GCCAGCAGGA ACTGGTACTG
GGCACGTCGG CCCCCGACTA TCCACCGTTC GACATCACCG GTGGCGGCAA CGACTACCAG
GGCCTGACCG CCGAGTATGC AAGCCTGATC GGCAAGGCCT TGCAGTTGCC AGTGAGGGTG
CTGCGTTTCT CCAGCCGGCA GGCGGCGGTG GAGGCGCTCC GGCACGGGGA TATTGACCTG
CTGGGCAGCG CCAATGGCTA CGAAGCGGCC AGTGACGGCC TGGCACTGTC GCGGCCCTAT
GCCGTCGACC AACCTGTATT GGTAACGCGT GAAGACGAAA AACGGGCGCT GGACATGGAC
CTTGCCGGCA TGCGCCTGGG TATGCTCTAC CACTATTTGC CTAGACAAGA AGTACTCACC
GCCTACCCCA AGGCCGAGCT GCTGGCCTTT GGTTCTTCCA GTCAGGCACT GAATGCTGTC
GCATTCGGCC AGGCCGACGT GTTCATCGGC GACACCATCT CCACGCACTA CCAGCTCAAC
CGTGGTCATC TGCCCCGCCT GCGCATGGCC AACTTCGGCA AACACGAGGC CATCGGCTTC
GGTTTTGCCT TGCGTCAGCA AGATACCGTG CTGCTGGACC TGGTGAACAC CATCCTGGAC
AGGCAAAGCC CGGCCATACG CTCCAGTATC TTCAAACGCT GGAGCGCCGG CAGCGACCTG
TTGCTGAGCG ATCGCCAACT GCAATTGAGC GCGGCCGAGC AGCAGTGGTT GCAGAAGCAT
CCCGTGATGC GCGTGGCAGC CGATGACGCG GCTGCACCAC TGTCCTATTT CGATGATTCG
GGGCATTTCC GAGGCATCAC CGCCGACCTG CTGGAACTCA TTCGCCTGCG CACCGGGTTG
CGTTTCGAAG TGCAGCGCGC CAGTGGCATT GCCGACATGG TCGCCCGCCT CAAGGATGGC
CGGGCCGATG TCATCGCCGC ACTGGCCAGC GCCGGGAAAC CAGGGGACGA CCTGCAAATC
AGCCGCCCCT ACCTCGAAAG CGCCTATGTG CTGGTCAACC ACAAGGACAA CAACACACTG
AGTTCACTGG AGCAGTTGCA GGGGCATCGC ATCGCCATTA CCCGGGACAG CACCATGAAC
GCCATGCTGT CCCGGGACTA CCCAAAGATA AGCTGGGTCG AGACCGAAAG CGCGTTCTAC
TCCATGGCGT TGCTCAACAG CGGGGCCGTC GATGCGGTGA TCACCACCCT GATCGACGCC
AACCACGCCT TGGCCAGCAA CCCCGAGCTG GTCATCCGCA CCTCGGTCGG CAGCGAACCC
GCCAACTTCG CCATGGCCAC CATTGCCCCG TCACCGGCGC TGTTGTCTAT CCTCGACAAG
GCTTTGCTGA GTATCTCACC CGAGGAGCTG GGGGTAATCA ACAACCGCTG GCGCGGCTTT
GGCAGGCATG AGGATGACAA CACCAAAGGC TACAGCCGCC TTGCCCTGCA GGTGGTGCTG
GCCACGGTCG TGCTTTTATT GCTGGCCCTG CTCTGGAATG CCCGCCTGCG GCTGCAGATT
CGCCAGCGCC AGTGCGCCGA ACGCGCGCTG AACGACCAGT TGGCATTCAT GCGCGCCCTG
CTCAACGGTA CGCCCCACCC CATGTATGTG CGCGACCGCG AGGGTTGCCT GAAAAGTTGC
AACTACAGCT ACCTTGAAGC CGTGCAGGCC CGCTCCGATC AGGTGATCGG CAGAAAACTC
AACGACAGCC TGTTTGCCGA TTCCGAGCAG GCTCGGCAGA TCCAGGCTGA TTACCAGAAG
GTCATGGCGG CAGGCTCGCC GCTGATCAAG GACCGCCCAC TACGGATCAA AGGCCGGGAA
TTGACTATCT ACCACTGGAT CTTGCCGTAC CGCGACTCCC TGGGTGAGGT GCAGGGGATC
ATCGGCGGCT GGATCGACAT CAGCGAACGC CGCCAACTGG TCATGGAGCT GCGCCAGGCC
AAGCAGCAGG CCGACGATGC CAACCGCGCC AAGAGCACAT TCCTGGCGAC CATCAGCCAC
GAAATCCGCA CCCCGATGAA CGCCGTCATC GGCATGCTGG AGCTGGCGGT CAAGCGCGCC
GACCAGGGCC GGGTGGACCG CAGCGCGCTG GAACTGGCAC ACCATTCGGC CAAAGACCTG
CTAGGCCTGA TCGGTGACAT TCTCGACATC GTGCGCATCG AGTCCGGGCA CTTGTCCCTG
GCCCCGGAGG TGGTCGACCT GGCGGCGCTG GTCGAATCGG TGGCGCGCAT TTTCGATGGC
CAGGCGCGGC AAAAAGGCCT GGCCCTGGAG GTGCAGATCG CCCCGGCCGC ACGCTGCCAT
GTCCTGCTTG ACCCGCTGCG CTTCAAGCAG GTGCTGTCCA ACCTGGTGAG CAATGCCATC
AAGTTCACCG AGCATGGTCA GGTGCGCATC TGCGTCAGCC TGCTGGATGA CGGTACCAGC
ACACCCGCCG TACTGGAGCT GGAGGTGCGC GACAGTGGCA TCGGCATCCA CCCCGACGAC
CTGCAGCGCC TGTTCAACCC GTTCATCCAG GCCAACCCGC ACAGCCAGGG CGCCCGCGCA
GGTACCGGGC TGGGCCTGGC CATCTGCCGC AACCTGTGCG AAATGATGGG CGGCAGCCTG
TCCATGAAGA GCCTGGAGGA TGTCGGTACC CAGGTGCGCC TGAAGATGCC GCTGCAACGG
GTGGATGGCG CAGAGCAGCC GAAACCGCTG CCCGAGCAGC TCGACGTGCC CGACCCACGG
CTGAACGTGC TGGTCATCGA TGATCACCCG GCCAACCTGC AACTGATGGC GCAACAACTT
GGCTACCTGG GCCTGGAGCA CGCCAGCGCC CGCGATGGGC GGGAAGGCCT GGCGACCTGG
CGGGAAGGCG ACTTCGATGT GCTGGTACTC GACTGCAACA TGCCGCACAT GAACGGTTAC
CAGCTGGCGA CTGCCGTGCG CGCCGAAGAA CGCCATGGCA AGCGCCCCCC CTGCACCATC
CTCGGCTATA CCGCCAACGC ACAGCCGGAA GTACGCCGCA AGTGCCTGAC CGCCGGCATG
GACGACTGCC TGCTCAAGCC CATCAGCCTG AGCACCCTCA GCCAGCGCCT GGCTGGCATT
CGCCCGCGCC GCCAGCAACG CCCCCGCCGC AAGCTGTACC AGCTGGACGG CCTGGCCGCC
GTGGTCGGGC CTGACCCGGT CGATCGTCAG CGCTTCCTGG AGGCCCTGCA CCAGAGCCTT
CAGGCCGATC TGGCCAGCCT GATGGCGCTT CACCCGCAAC ACGACAGCGG CGCCATTGCC
GAGCAGGCCC ATAAGGTGCT CAGCGCCGCA CGCATGCTGG AAGCCCCTGA CCTGATGGCG
GCCTGTGAAG CCCTCGAAGC CAGCGACTTG CCCACTGCCC AGGTGCGCCT GCGGCGCCAG
GTACTGGCAC GGCATATGTG CCGAGTGGAG CGTGCCCTGG CCAAGGAGTT GGCCACAAGC
AGAGATACTC AGGCAGGCAA CCACACGTGT TAA
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| Protein sequence | MARAINRLLL VLLLLSGATQ AGHREAASFT LLARSSARPV QPVLTPEQRQ WLEGQQELVL
GTSAPDYPPF DITGGGNDYQ GLTAEYASLI GKALQLPVRV LRFSSRQAAV EALRHGDIDL
LGSANGYEAA SDGLALSRPY AVDQPVLVTR EDEKRALDMD LAGMRLGMLY HYLPRQEVLT
AYPKAELLAF GSSSQALNAV AFGQADVFIG DTISTHYQLN RGHLPRLRMA NFGKHEAIGF
GFALRQQDTV LLDLVNTILD RQSPAIRSSI FKRWSAGSDL LLSDRQLQLS AAEQQWLQKH
PVMRVAADDA AAPLSYFDDS GHFRGITADL LELIRLRTGL RFEVQRASGI ADMVARLKDG
RADVIAALAS AGKPGDDLQI SRPYLESAYV LVNHKDNNTL SSLEQLQGHR IAITRDSTMN
AMLSRDYPKI SWVETESAFY SMALLNSGAV DAVITTLIDA NHALASNPEL VIRTSVGSEP
ANFAMATIAP SPALLSILDK ALLSISPEEL GVINNRWRGF GRHEDDNTKG YSRLALQVVL
ATVVLLLLAL LWNARLRLQI RQRQCAERAL NDQLAFMRAL LNGTPHPMYV RDREGCLKSC
NYSYLEAVQA RSDQVIGRKL NDSLFADSEQ ARQIQADYQK VMAAGSPLIK DRPLRIKGRE
LTIYHWILPY RDSLGEVQGI IGGWIDISER RQLVMELRQA KQQADDANRA KSTFLATISH
EIRTPMNAVI GMLELAVKRA DQGRVDRSAL ELAHHSAKDL LGLIGDILDI VRIESGHLSL
APEVVDLAAL VESVARIFDG QARQKGLALE VQIAPAARCH VLLDPLRFKQ VLSNLVSNAI
KFTEHGQVRI CVSLLDDGTS TPAVLELEVR DSGIGIHPDD LQRLFNPFIQ ANPHSQGARA
GTGLGLAICR NLCEMMGGSL SMKSLEDVGT QVRLKMPLQR VDGAEQPKPL PEQLDVPDPR
LNVLVIDDHP ANLQLMAQQL GYLGLEHASA RDGREGLATW REGDFDVLVL DCNMPHMNGY
QLATAVRAEE RHGKRPPCTI LGYTANAQPE VRRKCLTAGM DDCLLKPISL STLSQRLAGI
RPRRQQRPRR KLYQLDGLAA VVGPDPVDRQ RFLEALHQSL QADLASLMAL HPQHDSGAIA
EQAHKVLSAA RMLEAPDLMA ACEALEASDL PTAQVRLRRQ VLARHMCRVE RALAKELATS
RDTQAGNHTC
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