| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3616 |
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| Symbol | |
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| ID | 5191348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 4038650 |
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| End bp | 4039537 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640588071 |
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| Product | lipid kinase |
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| Protein accession | YP_001268924 |
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| Protein GI | 148548822 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1597] Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase |
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| TIGRFAM ID | [TIGR00147] lipid kinase, YegS/Rv2252/BmrU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.210112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.421083 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGGGC GCAAGGCAAT GTTGGTGCTG CACGGCAAGC AGGCGATGAA CGAAGACGTG
CGCAGCGCCG TGCGCGACCT GCGCGATAGC GGCTGGGTGC TGGATGTACG GGTTACCTGG
GAGGCGGGCG ACGCCCAACG GCTGGTCGCC GAGGCACTGG CGGCGGGTTA CAGCCATATC
GTCGCCGGTG GCGGGGACGG CACGTTGCGG GATGTGGCCG AGGCCATGGG CTTGGCCGCT
ACCAACGCCA GCCTGACCTT GTTGCCATTG GGGACGGCCA ACGATTTCGC CAAAGCCGCT
GGCATCCCCC TGGAGCCGGC ATCGGCGCTG GCCTTGCTGA ATGTCGCACC ACAACCGATA
GACCTGGGGC AGGCTGGCGA TCATCTGTTC CTCAACATGG CCACGGGTGG CTTTGGCAGC
CAGGTCACCG CCAATACCTC CGAAGACCTC AAGAAAGTAC TGGGCGCTGC CGCCTACCTG
TTCACCGGGT TATCCCGCTT CAGTGAGCTA CAGGCGGCTT CGGTAGAGCT ACAAGGGCCA
GGCTTCCACT GGCAAGGGGA TTTGCTGGCG CTGGGTATCG GCAATGGCCG ACAGGCTGGG
GGCGGGCAAG TGCTGTGCCC CGAAGCCATG GTCAACGATG GTTTGCTTGA CGTCGCTATT
CTGCCTGCAC CACAGGAAGT GGTGGGGGCT CTGCGGGACC TGTTGGGCGG TGACGGCCTG
TTCGTTCGGG CCAGGTTGCC ATGGGTCGAG ATCAAGAGTT CGCAAGGGTT GGACATCAAT
CTCGATGGCG AGCCGTTGCA GGCTGCCAGC CTGCGCTTTC AGGCAAGGCC GGCGGCGTTG
CACCTGCACC TGCCTGCCGG GTCGCCGTTG CTCAGTCATC CAGGCTGA
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| Protein sequence | MQGRKAMLVL HGKQAMNEDV RSAVRDLRDS GWVLDVRVTW EAGDAQRLVA EALAAGYSHI
VAGGGDGTLR DVAEAMGLAA TNASLTLLPL GTANDFAKAA GIPLEPASAL ALLNVAPQPI
DLGQAGDHLF LNMATGGFGS QVTANTSEDL KKVLGAAAYL FTGLSRFSEL QAASVELQGP
GFHWQGDLLA LGIGNGRQAG GGQVLCPEAM VNDGLLDVAI LPAPQEVVGA LRDLLGGDGL
FVRARLPWVE IKSSQGLDIN LDGEPLQAAS LRFQARPAAL HLHLPAGSPL LSHPG
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