Gene Pput_3578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3578 
Symbol 
ID5195240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3994765 
End bp3995064 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content63% 
IMG OID640588033 
Producttype IV pilus assembly PilZ 
Protein accessionYP_001268886 
Protein GI148548784 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00410027 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACA CGCCCTCCAG CCATAGCGAA AAACGCGACT TCATTCGCAT GCGCATCGAC 
ACCGAGGTCA GCCTTTTGCA CGAAGGCCAG GTCATTGCGG CGGTGTGCCT GGACCTGTCC
AGTGGCGGCA TGCAGGTGCA GGCGCCGCAG CGCTTTCTGG TGGGTGATCT GATCGAGGTA
CGGATCGACT CCGACCATCC GGCGCTGAAG GGGCTGCATG CCAGCACCGA AGTGGTATGG
ATCGCCGACC AGCCGAGTGG GCAGCAGAAG TTCGGGCTGC GGATCCTGGC CATGCATTGA
 
Protein sequence
MPHTPSSHSE KRDFIRMRID TEVSLLHEGQ VIAAVCLDLS SGGMQVQAPQ RFLVGDLIEV 
RIDSDHPALK GLHASTEVVW IADQPSGQQK FGLRILAMH