Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3578 |
Symbol | |
ID | 5195240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3994765 |
End bp | 3995064 |
Gene Length | 300 bp |
Protein Length | 99 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640588033 |
Product | type IV pilus assembly PilZ |
Protein accession | YP_001268886 |
Protein GI | 148548784 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00410027 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCACA CGCCCTCCAG CCATAGCGAA AAACGCGACT TCATTCGCAT GCGCATCGAC ACCGAGGTCA GCCTTTTGCA CGAAGGCCAG GTCATTGCGG CGGTGTGCCT GGACCTGTCC AGTGGCGGCA TGCAGGTGCA GGCGCCGCAG CGCTTTCTGG TGGGTGATCT GATCGAGGTA CGGATCGACT CCGACCATCC GGCGCTGAAG GGGCTGCATG CCAGCACCGA AGTGGTATGG ATCGCCGACC AGCCGAGTGG GCAGCAGAAG TTCGGGCTGC GGATCCTGGC CATGCATTGA
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Protein sequence | MPHTPSSHSE KRDFIRMRID TEVSLLHEGQ VIAAVCLDLS SGGMQVQAPQ RFLVGDLIEV RIDSDHPALK GLHASTEVVW IADQPSGQQK FGLRILAMH
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