Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3569 |
Symbol | |
ID | 5193248 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3985541 |
End bp | 3986167 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640588025 |
Product | lysine exporter protein LysE/YggA |
Protein accession | YP_001268878 |
Protein GI | 148548776 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTTCCCA TGAACGTGTG GTTCGCCTAT ACCGCCGCCT GCGTGCTGTT GGTGCTGGCA CCGGGCCCTG ACAACGTGTT GGCCATTGGC CGCGGTCTCA GCCAGGGTAA AGTCGCAGCG GCCGTATCCG GCATGGCGTC AGGAGCAGGC ATTTTGTTTC ACGTTGCAGC CGCTTCGTTA GGCTTGACCC TACTGATGCA AACCTCGGTG CTCGCATTTT GGGTGATCAA GCTCATGGGT GCCGGCTATC TGCTCTGGCT AGGGATCAAG GTGCTGCGCG CTCGTAGCCT GATAAGCTTT CAGCCGGCAT CCAGGCAATC GCTGCCCAGC ATTTTTCTGA CCGGTCTGCT TTCGGCTGCG CTCAACCCCA AGCCAGGTTT GTTCGTGCTG GCGTTCATTC CCCAGTTCGT CGACCCCGCA CGCGGGTCGG TCAGCGTGCA GATGTTGGTT TACGGCGTAT GGTTCGCTGC ACTCACGGCA TTGGGGTTTG CCTTGATGGG CATTTTCGCC ACGGGACTGT CTCGCTACCT GTACCGGCGG CCACGGCTGG TGAATGGGCT GAACGTGGGC GCAGGCCTCA CCTTCGTCGC GTCTGGCGTC TCGATTGCGG CGTTGAGCCA GAGATAG
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Protein sequence | MFPMNVWFAY TAACVLLVLA PGPDNVLAIG RGLSQGKVAA AVSGMASGAG ILFHVAAASL GLTLLMQTSV LAFWVIKLMG AGYLLWLGIK VLRARSLISF QPASRQSLPS IFLTGLLSAA LNPKPGLFVL AFIPQFVDPA RGSVSVQMLV YGVWFAALTA LGFALMGIFA TGLSRYLYRR PRLVNGLNVG AGLTFVASGV SIAALSQR
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