Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3563 |
Symbol | |
ID | 5192399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3981209 |
End bp | 3981601 |
Gene Length | 393 bp |
Protein Length | 130 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640588019 |
Product | glutathione-dependent formaldehyde-activating, GFA |
Protein accession | YP_001268872 |
Protein GI | 148548770 |
COG category | [S] Function unknown |
COG ID | [COG3791] Uncharacterized conserved protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.20004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGAGG CATACCAAGG AAGCTGCTTG TGTGCAGCAG TCTCTTACCT GCTACTCACC CCTCCCAAGG CAGTGACCCA CTGCCACTGC AGCCAGTGCC GCAAAAGTCA CGGCGCCGCA TTCGCTTCGT ACGGCAGTAT TCCGCGCAGC ATGCTGCGAA TACTGCGCGG CGCTACCAGC ATCAAGGCCT TCTCTTCATC ACCGACGGTT ACGCGCGAGT TCTGCACGGA GTGCGGCTCG ACCTTGTTCT GGTCACGCGC CCAAGGTGAG TTTGCCGACT GGATTTCGAT AGCACTGGGA ACGCTTGATA CACCGTTCCT GCCCAGGAAG CAGAAACATG TTTACGTCGA CGCTGCTGCC CCTTGGTACT CACCCTGTAA CCCTGACTCA TAA
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Protein sequence | MTEAYQGSCL CAAVSYLLLT PPKAVTHCHC SQCRKSHGAA FASYGSIPRS MLRILRGATS IKAFSSSPTV TREFCTECGS TLFWSRAQGE FADWISIALG TLDTPFLPRK QKHVYVDAAA PWYSPCNPDS
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