Gene Pput_3563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3563 
Symbol 
ID5192399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3981209 
End bp3981601 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content58% 
IMG OID640588019 
Productglutathione-dependent formaldehyde-activating, GFA 
Protein accessionYP_001268872 
Protein GI148548770 
COG category[S] Function unknown 
COG ID[COG3791] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.20004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGAGG CATACCAAGG AAGCTGCTTG TGTGCAGCAG TCTCTTACCT GCTACTCACC 
CCTCCCAAGG CAGTGACCCA CTGCCACTGC AGCCAGTGCC GCAAAAGTCA CGGCGCCGCA
TTCGCTTCGT ACGGCAGTAT TCCGCGCAGC ATGCTGCGAA TACTGCGCGG CGCTACCAGC
ATCAAGGCCT TCTCTTCATC ACCGACGGTT ACGCGCGAGT TCTGCACGGA GTGCGGCTCG
ACCTTGTTCT GGTCACGCGC CCAAGGTGAG TTTGCCGACT GGATTTCGAT AGCACTGGGA
ACGCTTGATA CACCGTTCCT GCCCAGGAAG CAGAAACATG TTTACGTCGA CGCTGCTGCC
CCTTGGTACT CACCCTGTAA CCCTGACTCA TAA
 
Protein sequence
MTEAYQGSCL CAAVSYLLLT PPKAVTHCHC SQCRKSHGAA FASYGSIPRS MLRILRGATS 
IKAFSSSPTV TREFCTECGS TLFWSRAQGE FADWISIALG TLDTPFLPRK QKHVYVDAAA
PWYSPCNPDS