Gene Pput_3529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3529 
Symbol 
ID5193683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3947085 
End bp3948191 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content64% 
IMG OID640587986 
Product2-aminoethylphosphonate--pyruvate transaminase 
Protein accessionYP_001268839 
Protein GI148548737 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 
TIGRFAM ID[TIGR02326] 2-aminoethylphosphonate--pyruvate transaminase
[TIGR03301] 2-aminoethylphosphonate aminotransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.318249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG CCCCGATTCT GCTGACCCCA GGTCCCCTGA CCACATCAAT CCGCACCCGC 
CAAGCCATGC TGGTGGACTG GGGCTCCTGG GACCGTGACT TCAACCAATT GACTGCCAGC
GTCTGTGAGC AACTGCTGGC CATCATCGAC GGCGCCAGCA GCCACCACTG CGTGCCCCTG
CAAGGCAGCG GCACCTTCGC CGTGGAAGCG GCCATCGGCA CCTTGGTGCC ACGCGATGGC
AAGGTTCTGG TACTGATCAA CGGCGCGTAC GGCCAGCGCC TGGCGAAGAT CTGCAAAGTG
CTGGGTCGCA CTTACAGCAC CTTCGAAACG GCCGAAGACC AGCCGACCAC GGCCGCCGAC
GTCGACCGGC TGCTGGCCGA AGACTCGGCC ATCACCCATG TGGCGCTGAT CCACTGTGAA
ACCAGCACCG GCATCCTGAA CCCGCTGCCC GAAATCGCCC AGGTGATCAA ACACCATGGC
AAGCGCCTGA TCATCGATGC CATGAGCTCG TTCGGTGCGC TGCCGATCGA TGCCCGCGAA
ATCCCCTTCG AAGCGCTGAT CGCAGCCTCC GGCAAGTGCC TGGAAGGCGT ACCCGGCATG
GGCTTCGTCT TCGCCGAAAA AAACGCCCTG GCGGCTGCCG AAGGCAATGC CCACTCGCTG
GCCATGGACC TGCACGACCA GCACGCCTAC ATGGCCAAGA CCGGGCAATG GCGCTTTACC
CCGCCTACCC ACGTGGTCGC GGCCCTGCAC GAAGCACTGC AGCAATACAA CGAGGAAGGT
GGCCTTCCGG CCCGCCACCA GCGCTACGCA GACAACTGCA AGACGCTGCT CGACGGCATG
GCAGCCATCG GCCTGCGCAG TTTCCTGCCT GCCGAGATCC AGGCGCCAAT CATCGTCACC
TTCCACGCCC CCACCGATGC CCGCTACCAG TTCAAGGACT TCTACGAGCG GGTCAAGGCC
AAGGGTTTCA TTCTCTACCC GGGCAAGTTG ACCCAAGTCG AAACCTTCCG CGTCGGCTGC
ATCGGCGTGG TCGGGGCGGA CGGCATGCAG GCCGCCGTGA ATGCCGTGGC CGAGGTGCTG
CGGGAAATGG AAGTGCTGGA CATCTGA
 
Protein sequence
MSNAPILLTP GPLTTSIRTR QAMLVDWGSW DRDFNQLTAS VCEQLLAIID GASSHHCVPL 
QGSGTFAVEA AIGTLVPRDG KVLVLINGAY GQRLAKICKV LGRTYSTFET AEDQPTTAAD
VDRLLAEDSA ITHVALIHCE TSTGILNPLP EIAQVIKHHG KRLIIDAMSS FGALPIDARE
IPFEALIAAS GKCLEGVPGM GFVFAEKNAL AAAEGNAHSL AMDLHDQHAY MAKTGQWRFT
PPTHVVAALH EALQQYNEEG GLPARHQRYA DNCKTLLDGM AAIGLRSFLP AEIQAPIIVT
FHAPTDARYQ FKDFYERVKA KGFILYPGKL TQVETFRVGC IGVVGADGMQ AAVNAVAEVL
REMEVLDI