| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3481 |
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| Symbol | |
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| ID | 5194768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3888624 |
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| End bp | 3890189 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640587933 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001268791 |
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| Protein GI | 148548689 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.41765 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGCCTCA ACCTGCCGGT AACCCCGGTC GAGCAACGTT TCCCCACCGA TCAGCGGCTG
ATTTCTGCTA CCGATACCGC CAGCCTGATC ACCTACTGCA ACCCTGAGTT TGCCGCCATC
AGTGGCTACA GCGAGGCCGA ACTGATCGGC AGCCCGCACA ACCTGGTGCG CCACCCGGAC
ATGCCGCCGG CGGTGTACGA GTTGATGTGG CGCTACCTGA AAGCCGGCAA GAGCTGGATG
GGTATCGTCA AGAACCGCTG CCGTAACGGC GACTACTACT GGGTCAATGC CTACGTCACG
CCCATCCTCG AAGGTGGGCG GGTCGTGGGT TACGAGTCGG TGCGCGTATG CCCCACGCGC
GAGCAAGTAG CCCGTGCCGA AGCCCTCTAT GCGCGGCTAC GCAACGGTCA GGCGGCATTG
TCGGCGCCGC GCCGTCTGAG CTTGCTGACG CAGGCCTTGG CCTTGCCACT GGCCGGTGGG
CTGCTGGCGG TGGGTGCCAA TCAGTTGTGG CCTGGCCTGG TGGGGCAGGG GCTGACCGTG
GGGCTGTTCG TGGCCTGCGG TCTATGGGCG CGCAATGCCC TCGGGCGGCA GCTGCAGCAG
ATTGTGCAGG GTGCCGAAGG TGCCTTCGCC GACCCGGTTG CAGCCTTGAC CTACAGCGAC
CTGTCAGGTG CTGCCGGGCA GTTGCAACTG ATGCTGATCA GCGAAGAGGC ACGCCTGAAA
ACCGCATTGA CGCGGCTAAG CGATCTGGCC GGGCAAATGG CCGTGGCCGC TCGCGATGCC
GGGCAGTTGT CGCGCAGCAC CGAGGCGGCA TTGCTGGAGC AGCGTGCCGA AACCGACCTG
AGCGCCACTG CAATGAACCA GATGGCCGCC TCCATTGGCG AAGTCGCCAA CCACGTGCAG
TTGACCGCCG CCGAGGCACA CACGGCGCAC CTGCTGGCCG AGCAAGGTAG CCAGGTGGCC
GATGCCAGCG GCACGGCCAT TCGTAACCTG GCCAGCACTG TGACGCAGAT CAACCAGGCG
GTCAGCCACC TGGCGGGTCA GACCGGCGCC ATCGCCGAGG CCGCCGGGAT GATCCGCGGC
ATTGCCGAGC AAACCAACCT GCTGGCCCTC AACGCCGCCA TCGAGGCTGC CCGTGCGGGC
GAGCAGGGCC GGGGCTTTGC CGTGGTCGCC GACGAGGTCC GGGCATTGGC CGACAAGACC
CGCCAGTCCA CCCTGCACAT CCAGGCCATC ATCGATGCCC TGCGCAGTGG CGCCGAGGAA
GCCGTGGCGA TCGCCAGCCG AGGCATCGAC GGTGCCGAGC AAGGCGTTGC CCAGGTGCAG
GAAGCCCGAC AGGCGCTGCA TGGCATTCGC GACGCGGTAC AGCGCATCAG CGACATGAGC
CAGCAGATGG CCACCGCCTC GCAGCAGCAG TCGGCGGTGG CAGAAGATGT TTCGCGGCAG
ATCAACGGCG TAGCCGGTAT CGCCCAGCAC AGCGCCCACA GCGCCAACGC CGCCGCCTCG
CGCGGTACCG AACTGGAACA CGTGTGCGCC GGATTGCGCG CCCTGGTGGA GCGCTTCAAC
CGCTAA
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| Protein sequence | MRLNLPVTPV EQRFPTDQRL ISATDTASLI TYCNPEFAAI SGYSEAELIG SPHNLVRHPD
MPPAVYELMW RYLKAGKSWM GIVKNRCRNG DYYWVNAYVT PILEGGRVVG YESVRVCPTR
EQVARAEALY ARLRNGQAAL SAPRRLSLLT QALALPLAGG LLAVGANQLW PGLVGQGLTV
GLFVACGLWA RNALGRQLQQ IVQGAEGAFA DPVAALTYSD LSGAAGQLQL MLISEEARLK
TALTRLSDLA GQMAVAARDA GQLSRSTEAA LLEQRAETDL SATAMNQMAA SIGEVANHVQ
LTAAEAHTAH LLAEQGSQVA DASGTAIRNL ASTVTQINQA VSHLAGQTGA IAEAAGMIRG
IAEQTNLLAL NAAIEAARAG EQGRGFAVVA DEVRALADKT RQSTLHIQAI IDALRSGAEE
AVAIASRGID GAEQGVAQVQ EARQALHGIR DAVQRISDMS QQMATASQQQ SAVAEDVSRQ
INGVAGIAQH SAHSANAAAS RGTELEHVCA GLRALVERFN R
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